Miyakogusa Predicted Gene
- Lj5g3v1853490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1853490.1 CUFF.56072.1
(1731 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS321555 similar to UniRef100_O80799 Cluster: T8F5.5 pr... 1047 0.0
gnl|LJGI|TC59773 similar to UniRef100_O80799 Cluster: T8F5.5 pro... 1021 0.0
gnl|LJGI|TC66754 similar to UniRef100_O80799 Cluster: T8F5.5 pro... 894 0.0
gnl|LJGI|FS346426 similar to UniRef100_O80799 Cluster: T8F5.5 pr... 856 0.0
gnl|LJGI|TC79764 similar to UniRef100_O80799 Cluster: T8F5.5 pro... 502 e-141
>gnl|LJGI|FS321555 similar to UniRef100_O80799 Cluster: T8F5.5 protein; n=1;
Arabidopsis thaliana|Rep: T8F5.5 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (18%)
Length = 699
Score = 1047 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 238 caccgtcattctgatgacgaatcccactcttccgaggacgaagacaagctcagggttcag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 caccgtcattctgatgacgaatcccactcttccgaggacgaagacaagctcagggttcag 231
Query: 298 cctctttccgtcgtgcgtgaattgatgaccgaattccccaacgttggcaacgatttgaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cctctttccgtcgtgcgtgaattgatgaccgaattccccaacgttggcaacgatttgaag 291
Query: 358 cagctcttgcaaatgattgacgacggtcaagctgttgacatcaagggtatatcagaaaga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cagctcttgcaaatgattgacgacggtcaagctgttgacatcaagggtatatcagaaaga 351
Query: 418 tctcttatgaagcatctgaagaagcttttcctttcattaaatcttaaggaaaatggggat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tctcttatgaagcatctgaagaagcttttcctttcattaaatcttaaggaaaatggggat 411
Query: 478 agagttttcttacggccttctaaagctcgccctacattggatgttgttggccctctaatt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agagttttcttacggccttctaaagctcgccctacattggatgttgttggccctctaatt 471
Query: 538 cagtctcttatgtctcccatgaatgagcaagctgatccttctacagaagtgcctgataca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cagtctcttatgtctcccatgaatgagcaagctgatccttctacagaagtgcctgataca 531
Query: 598 agttcagttcccatcgatgtggggagtgaacagatggtagatgatcatataacagcaact 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agttcagttcccatcgatgtggggagtgaacagatggtagatgatcatataacagcaact 591
Query: 658 ccagaggataattctgttggtcctagaagaaggatgatgggccctgctatgccatcagct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ccagaggataattctgttggtcctagaagaaggatgatgggccctgctatgccatcagct 651
Query: 718 gaattactcgcagctgctgccaaattaacggaggcacaggctgagctt 765
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gaattactcgcagctgctgccaaattaacggaggcacaggctgagctt 699
Score = 139 bits (70), Expect = 7e-32
Identities = 93/102 (91%), Gaps = 9/102 (8%)
Strand = Plus / Plus
Query: 76 accgcctccgactccgattcggactccgaccgctcttccagg---------cgccgccgt 126
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 accgcctccgactccgattcggactccgaccgctcttccaggcgccgccgtcgccgccgt 60
Query: 127 gagaaggagcgccgcagaaggagcgatggaggctccaagcgc 168
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaggagcgccgcagaaggagcgatggaggctccaagcgc 102
>gnl|LJGI|TC59773 similar to UniRef100_O80799 Cluster: T8F5.5 protein; n=1;
Arabidopsis thaliana|Rep: T8F5.5 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (18%)
Length = 785
Score = 1021 bits (515), Expect = 0.0
Identities = 515/515 (100%)
Strand = Plus / Plus
Query: 238 caccgtcattctgatgacgaatcccactcttccgaggacgaagacaagctcagggttcag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 caccgtcattctgatgacgaatcccactcttccgaggacgaagacaagctcagggttcag 330
Query: 298 cctctttccgtcgtgcgtgaattgatgaccgaattccccaacgttggcaacgatttgaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctctttccgtcgtgcgtgaattgatgaccgaattccccaacgttggcaacgatttgaag 390
Query: 358 cagctcttgcaaatgattgacgacggtcaagctgttgacatcaagggtatatcagaaaga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cagctcttgcaaatgattgacgacggtcaagctgttgacatcaagggtatatcagaaaga 450
Query: 418 tctcttatgaagcatctgaagaagcttttcctttcattaaatcttaaggaaaatggggat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tctcttatgaagcatctgaagaagcttttcctttcattaaatcttaaggaaaatggggat 510
Query: 478 agagttttcttacggccttctaaagctcgccctacattggatgttgttggccctctaatt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agagttttcttacggccttctaaagctcgccctacattggatgttgttggccctctaatt 570
Query: 538 cagtctcttatgtctcccatgaatgagcaagctgatccttctacagaagtgcctgataca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cagtctcttatgtctcccatgaatgagcaagctgatccttctacagaagtgcctgataca 630
Query: 598 agttcagttcccatcgatgtggggagtgaacagatggtagatgatcatataacagcaact 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 agttcagttcccatcgatgtggggagtgaacagatggtagatgatcatataacagcaact 690
Query: 658 ccagaggataattctgttggtcctagaagaaggatgatgggccctgctatgccatcagct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ccagaggataattctgttggtcctagaagaaggatgatgggccctgctatgccatcagct 750
Query: 718 gaattactcgcagctgctgccaaattaacggaggc 752
|||||||||||||||||||||||||||||||||||
Sbjct: 751 gaattactcgcagctgctgccaaattaacggaggc 785
Score = 333 bits (168), Expect = 2e-90
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 atgggcgacaaaaggaaaaagcagcgatatgttcacgacgacacaccctctccctcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atgggcgacaaaaggaaaaagcagcgatatgttcacgacgacacaccctctccctcttct 93
Query: 61 tcatcctcttcctccaccgcctccgactccgattcggactccgaccgctcttccaggcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tcatcctcttcctccaccgcctccgactccgattcggactccgaccgctcttccaggcgc 153
Query: 121 cgccgtgagaaggagcgccgcagaaggagcgatggaggctccaagcgc 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cgccgtgagaaggagcgccgcagaaggagcgatggaggctccaagcgc 201
>gnl|LJGI|TC66754 similar to UniRef100_O80799 Cluster: T8F5.5 protein; n=1; Arabidopsis
thaliana|Rep: T8F5.5 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (20%)
Length = 814
Score = 894 bits (451), Expect = 0.0
Identities = 457/459 (99%)
Strand = Plus / Plus
Query: 1273 cctggtggtatgcctacacaatcaactacgtttagccagggcacaaaggaaggtagaggt 1332
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 75 cctggtggtatgcctacacaatcaaccacgtttagccagggcacaaaggaaggtagaggt 134
Query: 1333 gatactagtgcttggacagacaccccttctgatagagcccagaaagcgaaaatgaattat 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gatactagtgcttggacagacaccccttctgatagagcccagaaagcgaaaatgaattat 194
Query: 1393 ttggaagcatacaatgaagcttctgcactggtctcaaatgaagaggataagaaaagggct 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttggaagcatacaatgaagcttctgcactggtctcaaatgaagaggataagaaaagggct 254
Query: 1453 aatgcagatgcagatttggtggacaaatacaataaagcaaaacgatcaaaaacattggtg 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatgcagatgcagatttggtggacaaatacaataaagcaaaacgatcaaaaacattggtg 314
Query: 1513 caaaagcatcaagaaatggttgctggcaaatcaaagaaaaagaccaagcaaaagccagag 1572
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caaaagcgtcaagaaatggttgctggcaaatcaaagaaaaagaccaagcaaaagccagag 374
Query: 1573 aaggaagattgggctggtcaacatccatggaagccatgggaccgtgaaaaggatctgaca 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaggaagattgggctggtcaacatccatggaagccatgggaccgtgaaaaggatctgaca 434
Query: 1633 gctgggaggcaaagtgtaaaattagatccagaaagcatgactcagggcttatcttcaagg 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctgggaggcaaagtgtaaaattagatccagaaagcatgactcagggcttatcttcaagg 494
Query: 1693 ttttctgctggaaactttcagaggaacttcctttgattt 1731
|||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttttctgctggaaactttcagaggaacttcctttgattt 533
>gnl|LJGI|FS346426 similar to UniRef100_O80799 Cluster: T8F5.5 protein; n=1; Arabidopsis
thaliana|Rep: T8F5.5 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (17%)
Length = 613
Score = 856 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 1280 gtatgcctacacaatcaactacgtttagccagggcacaaaggaaggtagaggtgatacta 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtatgcctacacaatcaactacgtttagccagggcacaaaggaaggtagaggtgatacta 554
Query: 1340 gtgcttggacagacaccccttctgatagagcccagaaagcgaaaatgaattatttggaag 1399
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtgcttggacagacaccccttttgatagagcccagaaagcgaaaatgaattatttggaag 494
Query: 1400 catacaatgaagcttctgcactggtctcaaatgaagaggataagaaaagggctaatgcag 1459
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 catacaatgaagcttttgcactggtctcaaatgaagaggataagaaaagggctaatgcag 434
Query: 1460 atgcagatttggtggacaaatacaataaagcaaaacgatcaaaaacattggtgcaaaagc 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgcagatttggtggacaaatacaataaagcaaaacgatcaaaaacattggtgcaaaagc 374
Query: 1520 atcaagaaatggttgctggcaaatcaaagaaaaagaccaagcaaaagccagagaaggaag 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atcaagaaatggttgctggcaaatcaaagaaaaagaccaagcaaaagccagagaaggaag 314
Query: 1580 attgggctggtcaacatccatggaagccatgggaccgtgaaaaggatctgacagctggga 1639
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 313 attgggctggtcaacatccatggaagccatgggaccgtgaaaaggatttgacagctggga 254
Query: 1640 ggcaaagtgtaaaattagatccagaaagcatgactcagggcttatcttcaaggttttctg 1699
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 253 ggcaaagtgtaaaattagatccagaaagcatgactcagggcttattttcaaggttttttg 194
Query: 1700 ctggaaactttcagaggaacttcctttgattt 1731
||||||||||||||||||||||||||||||||
Sbjct: 193 ctggaaactttcagaggaacttcctttgattt 162
>gnl|LJGI|TC79764 similar to UniRef100_O80799 Cluster: T8F5.5 protein; n=1; Arabidopsis
thaliana|Rep: T8F5.5 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (11%)
Length = 489
Score = 502 bits (253), Expect = e-141
Identities = 253/253 (100%)
Strand = Plus / Plus
Query: 1439 ataagaaaagggctaatgcagatgcagatttggtggacaaatacaataaagcaaaacgat 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ataagaaaagggctaatgcagatgcagatttggtggacaaatacaataaagcaaaacgat 163
Query: 1499 caaaaacattggtgcaaaagcatcaagaaatggttgctggcaaatcaaagaaaaagacca 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 caaaaacattggtgcaaaagcatcaagaaatggttgctggcaaatcaaagaaaaagacca 223
Query: 1559 agcaaaagccagagaaggaagattgggctggtcaacatccatggaagccatgggaccgtg 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 agcaaaagccagagaaggaagattgggctggtcaacatccatggaagccatgggaccgtg 283
Query: 1619 aaaaggatctgacagctgggaggcaaagtgtaaaattagatccagaaagcatgactcagg 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaaaggatctgacagctgggaggcaaagtgtaaaattagatccagaaagcatgactcagg 343
Query: 1679 gcttatcttcaag 1691
|||||||||||||
Sbjct: 344 gcttatcttcaag 356