Miyakogusa Predicted Gene

Lj5g3v1853480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1853480.1 Non Chatacterized Hit- tr|D7SR85|D7SR85_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,63.51,2e-19,GASA,Gibberellin regulated protein,CUFF.56068.1
         (429 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP057137 similar to UniRef100_A7Q7G5 Cluster: Chromosom...   575   e-164

>gnl|LJGI|BP057137 similar to UniRef100_A7Q7G5 Cluster: Chromosome chr18 scaffold_59,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_59, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (65%)
          Length = 471

 Score =  575 bits (290), Expect = e-164
 Identities = 324/341 (95%)
 Strand = Plus / Minus

                                                                       
Query: 89  cttgtagctcgagaaagcagctagtagcaatgtcattcgccaaaagcacattaatctttg 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cttgtagctcgagaaagcagctagtagcaatgtcattcgccaaaagcacattaatctttg 412

                                                                       
Query: 149 caattctctgtctcatcctagtacaggagcttgagatctgtgaaggaaatcaagacatgg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 caattctctgtctcatcctagtacaggagcttgagatctgtgaaggaaatcaagacatgg 352

                                                                       
Query: 209 atgctgtnnnnnnnnnnnnnnnnntttataagatagactgtggtgggaagtgcagccaca 268
           |||||||                 ||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgctgttcatcatcatcatcatctttataagatagactgtggtgggaagtgcagccaca 292

                                                                       
Query: 269 ggtgtagcaaggcgtcaaagcacaaaaggtgcatgagggcatgcaatagttgctgccaga 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggtgtagcaaggcgtcaaagcacaaaaggtgcatgagggcatgcaatagttgctgccaga 232

                                                                       
Query: 329 ggtgccactgcgtgccacctggcacatatgggaacaagcatgtttgtccttgctatgcca 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ggtgccactgcgtgccacctggcacatatgggaacaagcatgtttgtccttgctatgcca 172

                                                    
Query: 389 aactcaccactcatggaggaaagctcaagtgcccatgaatt 429
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aactcaccactcatggaggaaagctcaagtgcccatgaatt 131