Miyakogusa Predicted Gene
- Lj5g3v1853230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1853230.1 Non Chatacterized Hit- tr|I1LD60|I1LD60_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28560 PE,79.22,0,zinc
finger,Zinc finger, C2H2-like; no description,Zinc finger
C2H2-type/integrase DNA-binding domai,CUFF.56066.1
(1501 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60062 homologue to UniRef100_A5A8C1 Cluster: C2-H2 zi... 1455 0.0
gnl|LJGI|FS339239 similar to UniRef100_A5A8C1 Cluster: C2-H2 zin... 1281 0.0
gnl|LJGI|GO026189 similar to UniRef100_UPI000065F9DE Cluster: GT... 60 4e-08
>gnl|LJGI|TC60062 homologue to UniRef100_A5A8C1 Cluster: C2-H2 zinc finger protein;
n=1; Arabidopsis thaliana|Rep: C2-H2 zinc finger protein
- Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 884
Score = 1455 bits (734), Expect = 0.0
Identities = 737/738 (99%)
Strand = Plus / Plus
Query: 764 tcaagagggacgcgaatctccgaatgcacatgcgaggccacggtgatgagtataaaacac 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tcaagagggacgcgaatctccgaatgcacatgcgaggccacggtgatgagtataaaacac 62
Query: 824 cagcagctcttgcaaaaccacataaagaaaccgggtctgaaccaaagcttatcaagaggt 883
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 63 cagcagctcttgcaaaaccacataaagaaaccgggtctgaaccacagcttatcaagaggt 122
Query: 884 attcctgtccctacaccggctgcaagcgtaacaaggaacataagaaatttcagcctctga 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 attcctgtccctacaccggctgcaagcgtaacaaggaacataagaaatttcagcctctga 182
Query: 944 agactattttatgtgtgaaaaaccactacaaaagaacacactgtgataagagttacattt 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agactattttatgtgtgaaaaaccactacaaaagaacacactgtgataagagttacattt 242
Query: 1004 gcagcagatgccacacgaagaagttttcggtcatcgcagatctcaaaactcatgagaaac 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gcagcagatgccacacgaagaagttttcggtcatcgcagatctcaaaactcatgagaaac 302
Query: 1064 actgtggcagagataagtggctgtgttcatgtggaacaacattttcgaggaaagacaagc 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 actgtggcagagataagtggctgtgttcatgtggaacaacattttcgaggaaagacaagc 362
Query: 1124 tttttggacacattgcccttttccaaggccatacaccagcaattcctatggatgacgcca 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttttggacacattgcccttttccaaggccatacaccagcaattcctatggatgacgcca 422
Query: 1184 aaggaatcggcgagcagcgtgatcactgtgaaaccaaagaaaacagcagtagggtaggaa 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaggaatcggcgagcagcgtgatcactgtgaaaccaaagaaaacagcagtagggtaggaa 482
Query: 1244 gcatgaacttctgttttggatcaaatccttcaagtgatcaaaatggagttcaaaacatta 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcatgaacttctgttttggatcaaatccttcaagtgatcaaaatggagttcaaaacatta 542
Query: 1304 tggatgtcaaaggagatattgatgatcctatcagttatttctcatccctgaactttgaag 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tggatgtcaaaggagatattgatgatcctatcagttatttctcatccctgaactttgaag 602
Query: 1364 gctgtaactttggtgggtttaatgaattctcacagcctccatttgaagattccgaaggtt 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gctgtaactttggtgggtttaatgaattctcacagcctccatttgaagattccgaaggtt 662
Query: 1424 ctttctctttcctcatgtccggatcatttaattatgctccaaagtctgggggtgaaccat 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ctttctctttcctcatgtccggatcatttaattatgctccaaagtctgggggtgaaccat 722
Query: 1484 gttctgacaatctgtagc 1501
||||||||||||||||||
Sbjct: 723 gttctgacaatctgtagc 740
>gnl|LJGI|FS339239 similar to UniRef100_A5A8C1 Cluster: C2-H2 zinc finger protein;
n=1; Arabidopsis thaliana|Rep: C2-H2 zinc finger protein
- Arabidopsis thaliana (Mouse-ear cress), partial (13%)
Length = 751
Score = 1281 bits (646), Expect = 0.0
Identities = 646/646 (100%)
Strand = Plus / Plus
Query: 1 atggatccaaaaggaagcttatgtgctaacaactgggcagggtcctcttcttcctcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atggatccaaaaggaagcttatgtgctaacaactgggcagggtcctcttcttcctcagat 165
Query: 61 cctcctcctttctatggggtcaggactgaagcacctttcaaagaatttaaccagttccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cctcctcctttctatggggtcaggactgaagcacctttcaaagaatttaaccagttccct 225
Query: 121 ccaactcactctgcacttccaggtgaatctaacaaggtccctgatcaagaaagttatccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ccaactcactctgcacttccaggtgaatctaacaaggtccctgatcaagaaagttatccg 285
Query: 181 ccaagggactcgtcacaagcgagtaaactccaagattgggatccaagtgtgatgttgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ccaagggactcgtcacaagcgagtaaactccaagattgggatccaagtgtgatgttgaat 345
Query: 241 aacctttcattcctggaagaaaagattcaccagctccaggatctagtgcatttgattgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aacctttcattcctggaagaaaagattcaccagctccaggatctagtgcatttgattgtc 405
Query: 301 aacaaaaaatgccaaccttttgctcagccgcatgagctcgtgactcaggaacagcaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacaaaaaatgccaaccttttgctcagccgcatgagctcgtgactcaggaacagcaactc 465
Query: 361 gtcacagctgatcttacatcaattattgttcagttgatctctacagcaggtagtcttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtcacagctgatcttacatcaattattgttcagttgatctctacagcaggtagtcttctc 525
Query: 421 ccatctgttcggcacacccttacaaatacaaatccattggtcagtcagctcagccagctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ccatctgttcggcacacccttacaaatacaaatccattggtcagtcagctcagccagctt 585
Query: 481 cgtgggatgaaccttcccttcggaccaggctcaaatattggtaatcagatgcagccacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 cgtgggatgaaccttcccttcggaccaggctcaaatattggtaatcagatgcagccacaa 645
Query: 541 aataatagtggaagtaaattgtttgatcagtccattcagaatgatctacctcataactgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aataatagtggaagtaaattgtttgatcagtccattcagaatgatctacctcataactgt 705
Query: 601 gaaatggagcaaaaccacaatgtggaagaacatgaacataaagatg 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gaaatggagcaaaaccacaatgtggaagaacatgaacataaagatg 751
>gnl|LJGI|GO026189 similar to UniRef100_UPI000065F9DE Cluster: GTP-binding protein 1
(G-protein 1) (GP-1) (GP1).; n=1; Takifugu rubripes|Rep:
GTP-binding, partial (2%)
Length = 211
Score = 60.0 bits (30), Expect = 4e-08
Identities = 83/100 (83%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 535 ccacaaaataatagtggaagtaaattgtttgatcagtccattcagaatgatctacctcat 594
||||||||||||| |||| |||| ||| |||||| ||||| ||||||||||||||| |
Sbjct: 107 ccacaaaataataacggaaataaactgtctgatcaatccatgcagaatgatctacctagt 166
Query: 595 aactgtgaaatggagcaaaaccacaatgtggaagaacatg 634
|| | |||||||| |||||| ||| ||||||||||||
Sbjct: 167 aatcgcgaaatggaacaaaactaca---tggaagaacatg 203