Miyakogusa Predicted Gene

Lj5g3v1853190.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1853190.1 tr|G7IAF8|G7IAF8_MEDTR Protein SCARECROW
OS=Medicago truncatula GN=MTR_1g096030 PE=4 SV=1,82.71,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; GRAS,Transcription factor GRAS;
seg,NULL,CUFF.56052.1
         (799 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75440 similar to UniRef100_A7NYY1 Cluster: Chromosome...    58   9e-08
gnl|LJGI|TC71529 weakly similar to UniRef100_Q1PCS0 Cluster: GRA...    58   9e-08

>gnl|LJGI|TC75440 similar to UniRef100_A7NYY1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 975

 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 563 ttcatgtcattgactttgatgtctcctatggcttccaatggccttcactcatccaatccc 622
           ||||| ||||||| ||||   ||| ||||||||||||||||||||  |||||| |||| |
Sbjct: 872 ttcatatcattgattttggcatctgctatggcttccaatggccttgcctcatcaaatcac 931

                    
Query: 623 tctcagaaa 631
           |||||||||
Sbjct: 932 tctcagaaa 940


>gnl|LJGI|TC71529 weakly similar to UniRef100_Q1PCS0 Cluster: GRAS1; n=1; Nicotiana
           tabacum|Rep: GRAS1 - Nicotiana tabacum (Common tobacco),
           partial (27%)
          Length = 620

 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 563 ttcatgtcattgactttgatgtctcctatggcttccaatggccttcactcatccaatccc 622
           ||||| ||||||| ||||   ||| ||||||||||||||||||||  |||||| |||| |
Sbjct: 285 ttcatatcattgattttggcatctgctatggcttccaatggccttgcctcatcaaatcac 344

                    
Query: 623 tctcagaaa 631
           |||||||||
Sbjct: 345 tctcagaaa 353