Miyakogusa Predicted Gene
- Lj5g3v1853110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1853110.1 Non Chatacterized Hit- tr|D8S013|D8S013_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,41.67,0.000000000000001,Glu-tRNAGln amidotransferase C
subunit,NULL; SUBFAMILY NOT NAMED,NULL; FROUNT PROTEIN-RELATED,NULL;
,CUFF.56067.1
(423 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65398 similar to UniRef100_A7P4G1 Cluster: Chromosome... 797 0.0
gnl|LJGI|BP046621 similar to UniRef100_A7P4G1 Cluster: Chromosom... 178 2e-44
>gnl|LJGI|TC65398 similar to UniRef100_A7P4G1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 688
Score = 797 bits (402), Expect = 0.0
Identities = 416/423 (98%)
Strand = Plus / Plus
Query: 1 atgggtagcagcaaagggttgatattgctcagtagtaagggagcttcatcattatcacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgggtagcagcaaagggttgatattgctcagtagtaagggagcttcatcattatcacat 155
Query: 61 tcatttgcaaaggtatcaagtgttggccttcacaacaagtttcggagcttctcatcaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tcatttgcaaaggtatcaagtgttggccttcacaacaagtttcggagcttctcatcaacc 215
Query: 121 accatttgttcatcaactcaacctccagatttgactagtttggcnnnnnnngctcaaatc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 216 accatttgttcatcaactcaacctccagatttgactagtttggcaaaaaaagctcaaatc 275
Query: 181 tctcttacccctcatcaggttgatgaatttgctcccaaaattcaacaggtgatagagtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tctcttacccctcatcaggttgatgaatttgctcccaaaattcaacaggtgatagagtgg 335
Query: 241 tttgggcagctgcagagtgttgatctccaaagcgttgagccctccctcagagcagagtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tttgggcagctgcagagtgttgatctccaaagcgttgagccctccctcagagcagagtct 395
Query: 301 gaaaataatttgcgtgaaaatgctcctgaaacatttgacagcagggatgccatgattgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaaaataatttgcgtgaaaatgctcctgaaacatttgacagcagggatgccatgattgct 455
Query: 361 tctgttccaagctatgaggagccttatattaaagttccgagggtgttgagcatggattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctgttccaagctatgaggagccttatattaaagttccgagggtgttgagcatggattaa 515
Query: 421 aat 423
|||
Sbjct: 516 aat 518
>gnl|LJGI|BP046621 similar to UniRef100_A7P4G1 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 476
Score = 178 bits (90), Expect = 2e-44
Identities = 125/133 (93%), Gaps = 4/133 (3%)
Strand = Plus / Minus
Query: 295 gagtctgaaaataatttgcgtgaaaatgctcctgaaaca--tttgaca-gcagggatgcc 351
|||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 266 gagtctgaaaataatttgcgtgaaaatgctcctgaaaccactttgacacgccgggatgcc 207
Query: 352 a-tgattgcttctgttccaagctatgaggagccttatattaaagttccgagggtgttgag 410
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 actgattgcttctgttcccagctatgaggagccttatattaaagttccgagggtgttgag 147
Query: 411 catggattaaaat 423
| |||||||||||
Sbjct: 146 cctggattaaaat 134