Miyakogusa Predicted Gene
- Lj5g3v1849500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1849500.1 Non Chatacterized Hit- tr|K4CN35|K4CN35_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,59.09,9e-19,coiled-coil,NULL; seg,NULL; Vma12,ATPase, vacuolar
ER assembly factor, Vma12,CUFF.56026.1
(684 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59720 similar to UniRef100_A7PC71 Cluster: Chromosome... 1356 0.0
gnl|LJGI|TC82388 weakly similar to UniRef100_A7PC71 Cluster: Chr... 805 0.0
>gnl|LJGI|TC59720 similar to UniRef100_A7PC71 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 832
Score = 1356 bits (684), Expect = 0.0
Identities = 684/684 (100%)
Strand = Plus / Plus
Query: 1 atgagtgtggcagttgcagggaaaggaagaatgcctaccaccactgagaactcaacccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 atgagtgtggcagttgcagggaaaggaagaatgcctaccaccactgagaactcaacccgg 65
Query: 61 gtcgggttgatcatatccatcaccgactccattcggaccttccttaccggagcctccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gtcgggttgatcatatccatcaccgactccattcggaccttccttaccggagcctccaac 125
Query: 121 aacccgactctctctctcgaactccggcagtcatcctccgatctgctccgccaatccgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aacccgactctctctctcgaactccggcagtcatcctccgatctgctccgccaatccgat 185
Query: 181 gttccttacgcaccccttcgtgctgtctggatcgcctctgatccatccacaagacccgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gttccttacgcaccccttcgtgctgtctggatcgcctctgatccatccacaagacccgaa 245
Query: 241 ttgacccgactcttctcgggtacccgcttcgtcttctccagcccaaaacccagagagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgacccgactcttctcgggtacccgcttcgtcttctccagcccaaaacccagagagaag 305
Query: 301 agtgaagaattgaaggaaaggcttagaaagttggaagatttagcagaaaggaaagcatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtgaagaattgaaggaaaggcttagaaagttggaagatttagcagaaaggaaagcatat 365
Query: 361 caagagcttgtgaaggatattgcacccaagcaggatgttgtggaaccattctcttcttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 caagagcttgtgaaggatattgcacccaagcaggatgttgtggaaccattctcttcttac 425
Query: 421 aaggatcaattaggatttggtttgcatgttttggttaccatgtttactggctatcttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaggatcaattaggatttggtttgcatgttttggttaccatgtttactggctatcttgtt 485
Query: 481 ggatatgcagcgtttagagctttgtttaatcacggtcctgccatgaatgctgctggagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggatatgcagcgtttagagctttgtttaatcacggtcctgccatgaatgctgctggagga 545
Query: 541 attcttgggttggtgggtgccatgcttgttgagactttccttttcattattagaagttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 attcttgggttggtgggtgccatgcttgttgagactttccttttcattattagaagttcc 605
Query: 601 aatctagatgatagtaaaacaagaaagtccaataaaaaaccaagatcacccttttccaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aatctagatgatagtaaaacaagaaagtccaataaaaaaccaagatcacccttttccaca 665
Query: 661 tccagtctcaagaaaacccagtag 684
||||||||||||||||||||||||
Sbjct: 666 tccagtctcaagaaaacccagtag 689
>gnl|LJGI|TC82388 weakly similar to UniRef100_A7PC71 Cluster: Chromosome chr2
scaffold_11, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_11, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (33%)
Length = 486
Score = 805 bits (406), Expect = 0.0
Identities = 409/410 (99%)
Strand = Plus / Plus
Query: 1 atgagtgtggcagttgcagggaaaggaagaatgcctaccaccactgagaactcaacccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgagtgtggcagttgcagggaaaggaagaatgcctaccaccactgagaactcaacccgg 136
Query: 61 gtcgggttgatcatatccatcaccgactccattcggaccttccttaccggagcctccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gtcgggttgatcatatccatcaccgactccattcggaccttccttaccggagcctccaac 196
Query: 121 aacccgactctctctctcgaactccggcagtcatcctccgatctgctccgccaatccgat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 197 aacccgactctctctctcgaactccggcagtcatcctccgatctgctccgccaacccgat 256
Query: 181 gttccttacgcaccccttcgtgctgtctggatcgcctctgatccatccacaagacccgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gttccttacgcaccccttcgtgctgtctggatcgcctctgatccatccacaagacccgaa 316
Query: 241 ttgacccgactcttctcgggtacccgcttcgtcttctccagcccaaaacccagagagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgacccgactcttctcgggtacccgcttcgtcttctccagcccaaaacccagagagaag 376
Query: 301 agtgaagaattgaaggaaaggcttagaaagttggaagatttagcagaaaggaaagcatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agtgaagaattgaaggaaaggcttagaaagttggaagatttagcagaaaggaaagcatat 436
Query: 361 caagagcttgtgaaggatattgcacccaagcaggatgttgtggaaccatt 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caagagcttgtgaaggatattgcacccaagcaggatgttgtggaaccatt 486