Miyakogusa Predicted Gene
- Lj5g3v1839400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1839400.1 tr|G7I9K5|G7I9K5_MEDTR Nuclear receptor
corepressor OS=Medicago truncatula GN=MTR_1g095570 PE=4
SV=1,69.98,0,Homeodomain-like,Homeodomain-like; SANT SWI3, ADA2,
N-CoR and TFIIIB'' DNA-bin,SANT/Myb domain; coi,CUFF.56023.1
(4224 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AI967347 similar to UniRef100_A6ZRQ9 Cluster: Conserved... 589 e-167
gnl|LJGI|TC71848 similar to UniRef100_A7PI75 Cluster: Chromosome... 111 4e-23
gnl|LJGI|TC77382 76 2e-12
>gnl|LJGI|AI967347 similar to UniRef100_A6ZRQ9 Cluster: Conserved protein; n=1;
Saccharomyces cerevisiae YJM789|Rep: Conserved protein -
Saccharomyces cerevisiae (strain YJM789) (Baker's yeast),
partial (3%)
Length = 307
Score = 589 bits (297), Expect = e-167
Identities = 303/305 (99%)
Strand = Plus / Plus
Query: 3254 acacagatgatgcgtgtgttgttgagacaggctcagcagtaggcactgataagtctggca 3313
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3 acacagatgatgcgtgtgttgttgagacaggctcagcagtaggcactgatacgtctggca 62
Query: 3314 ctaaaacagatgaggatctgccttctatgaatgcattccatgatgaatccaaccctgtcg 3373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctaaaacagatgaggatctgccttctatgaatgcattccatgatgaatccaaccctgtcg 122
Query: 3374 aacctaggaacctgtctgctgaattgaatgaatcaaaggaaaataatttgacagctgtag 3433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aacctaggaacctgtctgctgaattgaatgaatcaaaggaaaataatttgacagctgtag 182
Query: 3434 atcttgaagacataaatttgatttctgatgcttgtgcaattaaggtggaatccaaactgg 3493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atcttgaagacataaatttgatttctgatgcttgtgcaattaaggtggaatccaaactgg 242
Query: 3494 gctctgatgatgatagtgaagttgtcttggcaagtcctgataagtctgcctcagtcagtg 3553
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 243 gctctgatgatgatagtgaagttgtcttggcaagtcctgataagtctgcctcagttagtg 302
Query: 3554 agcga 3558
|||||
Sbjct: 303 agcga 307
>gnl|LJGI|TC71848 similar to UniRef100_A7PI75 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 1243
Score = 111 bits (56), Expect = 4e-23
Identities = 101/116 (87%)
Strand = Plus / Plus
Query: 3037 gattggacagatgatgagaaggcagctttacttcaggctgtatcatcttttggtaaggat 3096
||||||||||||| ||||| |||| || ||||||||||||||||||||||| ||||||
Sbjct: 210 gattggacagatggggagaaagcaggcttgcttcaggctgtatcatcttttggaaaggat 269
Query: 3097 tttgcaaagatagcacggtgtgtgggaacgaaatcccaagaacagtgcaaagtttt 3152
|| |||| ||| |||| |||||| |||||||| |||| ||| ||||||||||||||
Sbjct: 270 ttcgcaatgattgcacagtgtgttggaacgaagtccctagaccagtgcaaagtttt 325
Score = 85.7 bits (43), Expect = 2e-15
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 2833 gtattggctggtatatgtggctctctttcatctgaggccatgagttcctgcatcacaagt 2892
|||||||||||||||||||| ||||||||||||||||| |||||| || |||| ||| ||
Sbjct: 3 gtattggctggtatatgtggttctctttcatctgaggctatgagtcccggcatgacaggt 62
Query: 2893 tcagttgatcctgtagatg 2911
|||||| || |||| ||||
Sbjct: 63 tcagttcatgctgtggatg 81
>gnl|LJGI|TC77382
Length = 499
Score = 75.8 bits (38), Expect = 2e-12
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 1 atgccgcctgaaccattgccttgggatcgaaaggacttcttcaaggagaggaagcacgag 60
|||||||| ||||| |||| |||||||||||||||| |||||||| ||||||| |||
Sbjct: 359 atgccgccggaaccggtgccatgggatcgaaaggactatttcaaggacaggaagcgcgac 418
Query: 61 aggtccgagtcggttgggtccgtcgcgagatggagaga 98
||||| ||||| ||||| | || ||||||||||||||
Sbjct: 419 aggtctgagtcacttgggcctgtggcgagatggagaga 456