Miyakogusa Predicted Gene
- Lj5g3v1815200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1815200.1 tr|I3SFN4|I3SFN4_LOTJA Chorismate synthase
OS=Lotus japonicus PE=2 SV=1,97.92,0,Chorismate_synt,Chorismate
synthase; CHORISMATE_SYNTHASE_3,Chorismate synthase, conserved site;
CHOR,CUFF.56013.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58033 similar to UniRef100_Q38RG6 Cluster: Chorismate... 1068 0.0
gnl|LJGI|TC73265 similar to UniRef100_Q30CZ7 Cluster: Chorismate... 155 4e-37
gnl|LJGI|TC60875 similar to UniRef100_Q30CZ7 Cluster: Chorismate... 155 4e-37
gnl|LJGI|BP070079 similar to UniRef100_Q38RG6 Cluster: Chorismat... 70 2e-11
>gnl|LJGI|TC58033 similar to UniRef100_Q38RG6 Cluster: Chorismate synthase; n=1;
Glycine max|Rep: Chorismate synthase - Glycine max
(Soybean), partial (90%)
Length = 1793
Score = 1068 bits (539), Expect = 0.0
Identities = 568/579 (98%), Gaps = 1/579 (0%)
Strand = Plus / Plus
Query: 1 atgatatctgctatagatgctattcgcgtgagaggtgattctgttggtggtgttgtaaca 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 813 atgatatctgctatagatgctat-cgcgtgagaggtgattctgttggtggtgttgtaaca 871
Query: 61 tgcattgtgaggaactgtccacgtggttttggttcccctgtatttgacaaacttgaagct 120
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 872 tgcattgtgaggaactgtccacgtggtcttggttcacctgtatttgacaaacttgaagct 931
Query: 121 gagctggctaaagctgttatgtcactgcctgcaactaagggctttcaatttggtagtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 gagctggctaaagctgttatgtcactgcctgcaactaagggctttcaatttggtagtggg 991
Query: 181 tttgcaggtacctttttgactggtagtgaacacaatgatgaattctacatagatgagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 tttgcaggtacctttttgactggtagtgaacacaatgatgaattctacatagatgagcat 1051
Query: 241 ggaaagatgagaacaaggacaaatcgttctggtgggatacagggtgggatttccaatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 ggaaagatgagaacaaggacaaatcgttctggtgggatacagggtgggatttccaatggg 1111
Query: 301 gaaataattaacatgagaatagctttcaagccgacagcaactattggaaagaagcaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 gaaataattaacatgagaatagctttcaagccgacagcaactattggaaagaagcaactt 1171
Query: 361 acagttactcgagnnnnnnnngaaactgagctgataacccgtggtcgccatgatccctgt 420
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 acagttactcgagaaaaaaaagaaactgagctgataacccgtggtcgccatgatccctgt 1231
Query: 421 gttgtcccaagagctgtacccatggtagaggccgtggtagctttggtgcttgtggaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 gttgtcccaagagctgtacccatggtagaggccgtggtagctttggtgcttgtggaccaa 1291
Query: 481 ttgatggcacaacacgcacagtgtaatctgtttcccataaactcagaattgcaagacccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 ttgatggcacaacacgcacagtgtaatctgtttcccataaactcagaattgcaagacccc 1351
Query: 541 ttgtcgtccatattcgagccagaagaagcgctcttctga 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 ttgtcgtccatattcgagccagaagaagcgctcttctga 1390
>gnl|LJGI|TC73265 similar to UniRef100_Q30CZ7 Cluster: Chorismate synthase; n=1;
Fagus sylvatica|Rep: Chorismate synthase - Fagus
sylvatica (Beechnut), partial (8%)
Length = 606
Score = 155 bits (78), Expect = 4e-37
Identities = 100/106 (94%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 85 ggttttggttcccctgtatttgacaaacttgaagctgagctggctaaagctgttatgtca 144
||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 30 ggttttggttcacctgtatttgaccaacttgaagctgagctggctaaagctgtgatgtca 89
Query: 145 ctgcctgcaactaagggctttcaatttggtagtgggtttgcaggta 190
| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 90 c-acctgcaactaagggctttccatttggtagtgggtttgcaggta 134
>gnl|LJGI|TC60875 similar to UniRef100_Q30CZ7 Cluster: Chorismate synthase; n=1;
Fagus sylvatica|Rep: Chorismate synthase - Fagus
sylvatica (Beechnut), partial (19%)
Length = 1510
Score = 155 bits (78), Expect = 4e-37
Identities = 100/106 (94%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 85 ggttttggttcccctgtatttgacaaacttgaagctgagctggctaaagctgttatgtca 144
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggttttggttctcctgtatttgacaaacttgaagctgagctggctaaagctgttatgtca 522
Query: 145 ctgcctgcaactaagggctttcaatttggtagtgggtttgcaggta 190
| ||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 523 c-acctgccactaagggctttccatttggtagtgggtttgtaggta 567
>gnl|LJGI|BP070079 similar to UniRef100_Q38RG6 Cluster: Chorismate synthase; n=1;
Glycine max|Rep: Chorismate synthase - Glycine max
(Soybean), partial (3%)
Length = 403
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 148 cctgcaactaagggctttcaatttggtagtgggtttgcaggta 190
||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 401 cctgcaactaagggcattcaattaggtagtgggtttgcaggta 359