Miyakogusa Predicted Gene
- Lj5g3v1814930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1814930.1 gene.g62410.t1.1
(1864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60931 weakly similar to UniRef100_A7NVH8 Cluster: Chr... 1294 0.0
gnl|LJGI|TC64867 similar to UniRef100_A7NVH8 Cluster: Chromosome... 914 0.0
gnl|LJGI|TC62486 similar to UniRef100_A7PYK6 Cluster: Chromosome... 66 9e-10
>gnl|LJGI|TC60931 weakly similar to UniRef100_A7NVH8 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 805
Score = 1294 bits (653), Expect = 0.0
Identities = 662/665 (99%)
Strand = Plus / Plus
Query: 106 tgccccatggatctcagctacgtctcaaccttcccctgggacaccaccacctgcagaggc 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tgccccatggatctcagctacgtctcaaccttcccctgggacaccaccacctgcagaggc 200
Query: 166 gacccaatcgacacaaaccactgttgccaatccctcctcagactcttcggcatcggcatg 225
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gacccaatcgacacaaaccactgttgccaatccctcctcagcctcttcggcatcggcatg 260
Query: 226 gccaagcacctcaaagaaacatccatgttccagctccgcgacgaggccaccgcctccgcg 285
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcccagcacctcaaagaaacctccatgttccagctccgcgacgaggccaccgcctccgcg 320
Query: 286 tgcctctccgatctccaaatcaagctctctgcgctctcaatccaaccctcactggtccct 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctctccgatctccaaatcaagctctctgcgctctcaatccaaccctcactggtccct 380
Query: 346 cagtgcttccaaaactccacacagttcgtcaccaattcgtcaaactgcgcagggatcaac 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgcttccaaaactccacacagttcgtcaccaattcgtcaaactgcgcagggatcaac 440
Query: 406 aacacccaggattggaaggagaaagtgggagcagtgagtcccttagatactgcctgcaaa 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacccaggattggaaggagaaagtgggagcagtgagtcccttagatactgcctgcaaa 500
Query: 466 ggggatatgagttcacagacgaggtgtggaatttgcactgatgcagggttcaaggtgaat 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggatatgagttcacagacgaggtgtggaatttgcactgatgcagggttcaaggtgaat 560
Query: 526 tctcagcttcttgggattgacccaaatgctacaaagtgtttctactattcaattttgtat 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcagcttcttgggattgacccaaatgctacaaagtgtttctactattcaattttgtat 620
Query: 586 gctggtgggattgtcaatgagtttggtcctactgatgttggaactgctggttgcatattg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctggtgggattgtcaatgagtttggtcctactgatgttggaactgctggttgcatattg 680
Query: 646 ggtatgccaattgcaacaaaagggtcatcatcaaataaggatcaagttttgaagcttgtt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtatgccaattgcaacaaaagggtcatcatcaaataaggatcaagttttgaagcttgtt 740
Query: 706 tttgggttattgggtgctttgattggtgttcttcttgcattttttctgattattatgtat 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgggttattgggtgctttgattggtgttcttcttgcattttttctgattattatgtat 800
Query: 766 aggaa 770
|||||
Sbjct: 801 aggaa 805
>gnl|LJGI|TC64867 similar to UniRef100_A7NVH8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 669
Score = 914 bits (461), Expect = 0.0
Identities = 461/461 (100%)
Strand = Plus / Plus
Query: 1404 ctatggctatttggcaccagagtatgctctttatggacaactaactgataaaagtgatgt 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctatggctatttggcaccagagtatgctctttatggacaactaactgataaaagtgatgt 60
Query: 1464 ctatagcttcggtattgtgattcttgaagtcatgagtgggagaaaagtgcttgacactat 1523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatagcttcggtattgtgattcttgaagtcatgagtgggagaaaagtgcttgacactat 120
Query: 1524 gaattcacctgtggttttgatcacggattgggcgtggtcacttgcgaaatcggggatggt 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaattcacctgtggttttgatcacggattgggcgtggtcacttgcgaaatcggggatggt 180
Query: 1584 ggaggagattttcgacgagtcgataaagaaagaagggccagagaagatcatggagaggtt 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaggagattttcgacgagtcgataaagaaagaagggccagagaagatcatggagaggtt 240
Query: 1644 tgttcttgtcggcattctttgcgctcatgcaatggtcgcgttaaggcctactattgctga 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttcttgtcggcattctttgcgctcatgcaatggtcgcgttaaggcctactattgctga 300
Query: 1704 ggcgcttaagatgttagaaggggacattgacattcccaatttaccagacaggcctgtacc 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcgcttaagatgttagaaggggacattgacattcccaatttaccagacaggcctgtacc 360
Query: 1764 acttggtcatgaatcttttcagtcttctctgttgagtgggatgcaaagtggaagaacaac 1823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttggtcatgaatcttttcagtcttctctgttgagtgggatgcaaagtggaagaacaac 420
Query: 1824 gccaaatttttcatctttttcaacaagcacgagcatagttt 1864
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccaaatttttcatctttttcaacaagcacgagcatagttt 461
>gnl|LJGI|TC62486 similar to UniRef100_A7PYK6 Cluster: Chromosome chr12 scaffold_38,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_38, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1562
Score = 65.9 bits (33), Expect = 9e-10
Identities = 114/141 (80%)
Strand = Plus / Plus
Query: 1332 agtttcagattttgggttggctaaacaagggaatgaaggccagtctcatcttacaacaag 1391
|||| ||||||| ||| | ||||||||| | | || |||||||||||||| || |||||
Sbjct: 298 agttgcagatttcgggcttgctaaacaaagcagggagggccagtctcatctcactacaag 357
Query: 1392 ggttgctggcacctatggctatttggcaccagagtatgctctttatggacaactaactga 1451
|| ||||| || |||| ||| | ||||| || ||||| || ||||| ||||| |||||
Sbjct: 358 agtagctggaactcatggatatctagcaccggaatatgcactatatggtcaactgactga 417
Query: 1452 taaaagtgatgtctatagctt 1472
|| |||||||||||||||||
Sbjct: 418 gaagagtgatgtctatagctt 438