Miyakogusa Predicted Gene
- Lj5g3v1811810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1811810.1 tr|B9DI18|B9DI18_ARATH AT3G54810 protein
OS=Arabidopsis thaliana GN=AT3G54810 PE=2
SV=1,41.18,0.0000000000005,GATA_ZN_FINGER_2,Zinc finger, GATA-type;
ZINC FINGER (GATA TYPE) FAMILY PROTEIN,NULL; TRANSCRIPTION
,CUFF.55985.1
(1059 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69016 similar to UniRef100_A7PI38 Cluster: Chromosome... 2091 0.0
gnl|LJGI|FS329672 similar to UniRef100_Q76DX9 Cluster: AG-motif ... 1322 0.0
gnl|LJGI|TC71466 similar to UniRef100_A7PI38 Cluster: Chromosome... 991 0.0
gnl|LJGI|TC61360 similar to UniRef100_A7PI38 Cluster: Chromosome... 90 3e-17
gnl|LJGI|TC77034 similar to UniRef100_A7P7X0 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC78738 similar to UniRef100_A2Q5Q2 Cluster: Zinc finge... 56 5e-07
gnl|LJGI|BP031175 similar to UniRef100_A7P754 Cluster: Chromosom... 54 2e-06
>gnl|LJGI|TC69016 similar to UniRef100_A7PI38 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1726
Score = 2091 bits (1055), Expect = 0.0
Identities = 1058/1059 (99%)
Strand = Plus / Plus
Query: 1 atggttggaccaaacttcatggacgagttagactgcggaagcttctttgaccacatcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggttggaccaaacttcatggacgagttagactgcggaagcttctttgaccacatcgac 271
Query: 61 gacctcctcgatttccccgtcgaggacgtcgacggcaccgccaccaccttaccatccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gacctcctcgatttccccgtcgaggacgtcgacggcaccgccaccaccttaccatccgcc 331
Query: 121 gccgccgcagccgcgaactgcacctccctagccagcatctggcccccagaaaccgactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gccgccgcagccgcgaactgcacctccctagccagcatctggcccccagaaaccgactcg 391
Query: 181 tttcccggctccgactcggtgttttccggcaacagcggctcggacctctcggcggggctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 392 tttcccggctccgactcggtgttttccggcaacagcggctcggacctctcggcggagctc 451
Query: 241 tctgttccgtatgaagacattgtccaattggaatggctgtcaaactttgtggaggactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tctgttccgtatgaagacattgtccaattggaatggctgtcaaactttgtggaggactca 511
Query: 301 tatgggggtagcctcaccatgaagaaggtggagcatcagcaaccatcatccaccatcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tatgggggtagcctcaccatgaagaaggtggagcatcagcaaccatcatccaccatcaca 571
Query: 361 accaaagaggattcagtgcacaaccagttccagacatcaagcccagtttctgtcttagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 accaaagaggattcagtgcacaaccagttccagacatcaagcccagtttctgtcttagaa 631
Query: 421 agcagcagctcctgctccggcgggaagccggcagagatttacatccctgtcccttgtggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 agcagcagctcctgctccggcgggaagccggcagagatttacatccctgtcccttgtggg 691
Query: 481 cgcgcacgcagcaagcgtccgcgccctgcgagcttcaatcctcgctctgccatgcagctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cgcgcacgcagcaagcgtccgcgccctgcgagcttcaatcctcgctctgccatgcagctc 751
Query: 541 atttcccctgcttcctcttttattggggagaacaacaccatgaagcctaattatcatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 atttcccctgcttcctcttttattggggagaacaacaccatgaagcctaattatcatcat 811
Query: 601 catgtcaggacctcttcagattctgagaattttgctgagtctcagcctgtgattaccaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 catgtcaggacctcttcagattctgagaattttgctgagtctcagcctgtgattaccaag 871
Query: 661 atgatgatgccaaaacaggcttctggggagcctaagaagaagaagaagatcaaggttcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 atgatgatgccaaaacaggcttctggggagcctaagaagaagaagaagatcaaggttcca 931
Query: 721 cttccacttgctccatctgatggaaacaatattcagaatggttcacaaccggtcaggaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 cttccacttgctccatctgatggaaacaatattcagaatggttcacaaccggtcaggaaa 991
Query: 781 tgcatgcattgtgagatcaccaagactcctcagtggagggcagggccaatggggccgaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 tgcatgcattgtgagatcaccaagactcctcagtggagggcagggccaatggggccgaaa 1051
Query: 841 acactctgcaatgcttgcggcgttcgctacaagtctggccgcctcttccctgagtaccgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 acactctgcaatgcttgcggcgttcgctacaagtctggccgcctcttccctgagtaccgg 1111
Query: 901 cctgccgccagcccgacattctgccccgccgtgcactcgaattcccataagaaggtcctg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 cctgccgccagcccgacattctgccccgccgtgcactcgaattcccataagaaggtcctg 1171
Query: 961 gaaatgagatgcaagggtgaggattctggccttgcagatcagcctgaacttattccaaac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 gaaatgagatgcaagggtgaggattctggccttgcagatcagcctgaacttattccaaac 1231
Query: 1021 actaacagcagcctcaccctggaggaatacatgtgaggg 1059
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 actaacagcagcctcaccctggaggaatacatgtgaggg 1270
>gnl|LJGI|FS329672 similar to UniRef100_Q76DX9 Cluster: AG-motif binding protein-5;
n=1; Nicotiana tabacum|Rep: AG-motif binding protein-5 -
Nicotiana tabacum (Common tobacco), partial (32%)
Length = 772
Score = 1322 bits (667), Expect = 0.0
Identities = 670/671 (99%)
Strand = Plus / Plus
Query: 1 atggttggaccaaacttcatggacgagttagactgcggaagcttctttgaccacatcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atggttggaccaaacttcatggacgagttagactgcggaagcttctttgaccacatcgac 161
Query: 61 gacctcctcgatttccccgtcgaggacgtcgacggcaccgccaccaccttaccatccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gacctcctcgatttccccgtcgaggacgtcgacggcaccgccaccaccttaccatccgcc 221
Query: 121 gccgccgcagccgcgaactgcacctccctagccagcatctggcccccagaaaccgactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gccgccgcagccgcgaactgcacctccctagccagcatctggcccccagaaaccgactcg 281
Query: 181 tttcccggctccgactcggtgttttccggcaacagcggctcggacctctcggcggggctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 282 tttcccggctccgactcggtgttttccggcaacagcggctcggacctctcggcggagctc 341
Query: 241 tctgttccgtatgaagacattgtccaattggaatggctgtcaaactttgtggaggactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tctgttccgtatgaagacattgtccaattggaatggctgtcaaactttgtggaggactca 401
Query: 301 tatgggggtagcctcaccatgaagaaggtggagcatcagcaaccatcatccaccatcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tatgggggtagcctcaccatgaagaaggtggagcatcagcaaccatcatccaccatcaca 461
Query: 361 accaaagaggattcagtgcacaaccagttccagacatcaagcccagtttctgtcttagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 accaaagaggattcagtgcacaaccagttccagacatcaagcccagtttctgtcttagaa 521
Query: 421 agcagcagctcctgctccggcgggaagccggcagagatttacatccctgtcccttgtggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agcagcagctcctgctccggcgggaagccggcagagatttacatccctgtcccttgtggg 581
Query: 481 cgcgcacgcagcaagcgtccgcgccctgcgagcttcaatcctcgctctgccatgcagctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cgcgcacgcagcaagcgtccgcgccctgcgagcttcaatcctcgctctgccatgcagctc 641
Query: 541 atttcccctgcttcctcttttattggggagaacaacaccatgaagcctaattatcatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atttcccctgcttcctcttttattggggagaacaacaccatgaagcctaattatcatcat 701
Query: 601 catgtcaggacctcttcagattctgagaattttgctgagtctcagcctgtgattaccaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 catgtcaggacctcttcagattctgagaattttgctgagtctcagcctgtgattaccaag 761
Query: 661 atgatgatgcc 671
|||||||||||
Sbjct: 762 atgatgatgcc 772
>gnl|LJGI|TC71466 similar to UniRef100_A7PI38 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 775
Score = 991 bits (500), Expect = 0.0
Identities = 503/504 (99%)
Strand = Plus / Plus
Query: 1 atggttggaccaaacttcatggacgagttagactgcggaagcttctttgaccacatcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atggttggaccaaacttcatggacgagttagactgcggaagcttctttgaccacatcgac 331
Query: 61 gacctcctcgatttccccgtcgaggacgtcgacggcaccgccaccaccttaccatccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gacctcctcgatttccccgtcgaggacgtcgacggcaccgccaccaccttaccatccgcc 391
Query: 121 gccgccgcagccgcgaactgcacctccctagccagcatctggcccccagaaaccgactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gccgccgcagccgcgaactgcacctccctagccagcatctggcccccagaaaccgactcg 451
Query: 181 tttcccggctccgactcggtgttttccggcaacagcggctcggacctctcggcggggctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 452 tttcccggctccgactcggtgttttccggcaacagcggctcggacctctcggcggagctc 511
Query: 241 tctgttccgtatgaagacattgtccaattggaatggctgtcaaactttgtggaggactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tctgttccgtatgaagacattgtccaattggaatggctgtcaaactttgtggaggactca 571
Query: 301 tatgggggtagcctcaccatgaagaaggtggagcatcagcaaccatcatccaccatcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tatgggggtagcctcaccatgaagaaggtggagcatcagcaaccatcatccaccatcaca 631
Query: 361 accaaagaggattcagtgcacaaccagttccagacatcaagcccagtttctgtcttagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 accaaagaggattcagtgcacaaccagttccagacatcaagcccagtttctgtcttagaa 691
Query: 421 agcagcagctcctgctccggcgggaagccggcagagatttacatccctgtcccttgtggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 agcagcagctcctgctccggcgggaagccggcagagatttacatccctgtcccttgtggg 751
Query: 481 cgcgcacgcagcaagcgtccgcgc 504
||||||||||||||||||||||||
Sbjct: 752 cgcgcacgcagcaagcgtccgcgc 775
>gnl|LJGI|TC61360 similar to UniRef100_A7PI38 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1682
Score = 89.7 bits (45), Expect = 3e-17
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 778 aaatgcatgcattgtgagatcaccaagactcctcagtggagggcagggccaatggggccg 837
|||||||||||||||||| | || ||||| || || ||||| | ||| || ||||| ||
Sbjct: 874 aaatgcatgcattgtgaggtgacaaagaccccacaatggagagaaggacctatgggtccc 933
Query: 838 aaaacactctgcaatgcttgcggcgttcgctacaagtctggccgcctcttccctgagtac 897
|| || || |||||||||||||| ||||| ||| ||| ||||||||||||||||| |||
Sbjct: 934 aagacgctatgcaatgcttgcggtgttcggtaccggtcgggccgcctcttccctgaatac 993
Query: 898 cggcctgccgccagccc 914
|||||||| || |||||
Sbjct: 994 cggcctgcagctagccc 1010
>gnl|LJGI|TC77034 similar to UniRef100_A7P7X0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1050
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 811 cagtggagggcagggccaatggggccgaaaacactctgcaatgcttgcggcgt 863
||||||||||| || || |||| ||||||||||| |||||||||||||||||
Sbjct: 605 cagtggagggccggcccgctgggcccgaaaacactatgcaatgcttgcggcgt 657
>gnl|LJGI|TC78738 similar to UniRef100_A2Q5Q2 Cluster: Zinc finger, GATA-type; n=1;
Medicago truncatula|Rep: Zinc finger, GATA-type -
Medicago truncatula (Barrel medic), partial (72%)
Length = 1234
Score = 56.0 bits (28), Expect = 5e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 811 cagtggagggcagggccaatggggccgaaaacactctgcaatgcttgcggcgttcgctac 870
|||||||||||||||||| ||||||| || ||||| |||||||| || || || | |||
Sbjct: 724 cagtggagggcagggccattggggccaaagacactatgcaatgcatgtggagtgaggtac 783
Query: 871 aagtctgg 878
||||||||
Sbjct: 784 aagtctgg 791
>gnl|LJGI|BP031175 similar to UniRef100_A7P754 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 524
Score = 54.0 bits (27), Expect = 2e-06
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 823 gggccaatggggccgaaaacactctgcaatgcttgcggcgttcgctacaagtctggccgc 882
||||| ||||| ||||| || || || |||||||||||||| | |||||||| ||||||
Sbjct: 476 gggcccatgggcccgaagacgctgtgtaatgcttgcggcgtcaggtacaagtcaggccgc 417
Query: 883 ctcttccctgagtaccggcctgccgccagcccgac 917
||| | ||||| ||| |||| || || ||||||||
Sbjct: 416 ctcgtgcctgaatacaggcccgcagcgagcccgac 382