Miyakogusa Predicted Gene

Lj5g3v1811660.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1811660.1 Non Chatacterized Hit- tr|I1LD05|I1LD05_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.76,0,Pleckstrin
homology domain.,Pleckstrin homology domain; in StAR and
phosphatidylcholine transfer pro,CUFF.55983.1
         (2193 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75045 weakly similar to UniRef100_A7NZK6 Cluster: Chr...   430   e-119
gnl|LJGI|TC79525 similar to UniRef100_Q0IWY0 Cluster: Os10g04798...   256   5e-67

>gnl|LJGI|TC75045 weakly similar to UniRef100_A7NZK6 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 577

 Score =  430 bits (217), Expect = e-119
 Identities = 217/217 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgttccacagagtgaggggaaaatggaagggtggctctatctcattcgctccaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgggtgttccacagagtgaggggaaaatggaagggtggctctatctcattcgctccaat 420

                                                                       
Query: 61  cgttttggtcagctttcttcacgtaagaggtactttatcctcaaagaaaatatcctcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgttttggtcagctttcttcacgtaagaggtactttatcctcaaagaaaatatcctcaga 480

                                                                       
Query: 121 agctttaagatcaaacctgcttcccaaatggaggagccaatcagaagtgcaataatagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctttaagatcaaacctgcttcccaaatggaggagccaatcagaagtgcaataatagac 540

                                                
Query: 181 tcctgtgttagggttactgacaatggaagggagagta 217
           |||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcctgtgttagggttactgacaatggaagggagagta 577


>gnl|LJGI|TC79525 similar to UniRef100_Q0IWY0 Cluster: Os10g0479800 protein; n=2; Oryza
            sativa|Rep: Os10g0479800 protein - Oryza sativa subsp.
            japonica (Rice), partial (30%)
          Length = 507

 Score =  256 bits (129), Expect = 5e-67
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2065 aatttggtggtagaaatggcatttttgatacagggtaacacacaagatgagctcccagaa 2124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aatttggtggtagaaatggcatttttgatacagggtaacacacaagatgagctcccagaa 60

                                                                        
Query: 2125 gtcctcattggaacatgtagactgaaccacatggatgcatcaaaagcatttgtgttgaaa 2184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gtcctcattggaacatgtagactgaaccacatggatgcatcaaaagcatttgtgttgaaa 120

                     
Query: 2185 tcataatat 2193
            |||||||||
Sbjct: 121  tcataatat 129