Miyakogusa Predicted Gene

Lj5g3v1811630.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1811630.1 tr|G7JB99|G7JB99_MEDTR ATP-dependent DNA helicase
PIF1 OS=Medicago truncatula GN=MTR_3g070660 PE=4
S,61.54,0.0004,PIF1,DNA helicase PIF1, ATP-dependent;
Herpes_Helicase,DNA helicase; UNCHARACTERIZED,NULL; P-loop
co,CUFF.55993.1
         (661 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77942                                                      155   4e-37
gnl|LJGI|TC81392 weakly similar to UniRef100_A7PM27 Cluster: Chr...    62   5e-09

>gnl|LJGI|TC77942 
          Length = 938

 Score =  155 bits (78), Expect = 4e-37
 Identities = 84/86 (97%)
 Strand = Plus / Plus

                                                                       
Query: 576 aatcctcatttgcgatggtgacgacagtaattcaaatagtacttctaatgtagtttacaa 635
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 798 aatcctcatttgcgatggtgacgacagtaattcaaatagtacttctaatgtagtttacac 857

                                     
Query: 636 agaagtgtttcgcaatgtagtgtgaa 661
           |||||||||||||| |||||||||||
Sbjct: 858 agaagtgtttcgcactgtagtgtgaa 883


>gnl|LJGI|TC81392 weakly similar to UniRef100_A7PM27 Cluster: Chromosome chr14
            scaffold_21, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (23%)
          Length = 1217

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 611  atagtacttctaatgtagtttacaaagaagtgtttcgcaatgt 653
            |||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 1132 atagtacttcaaatgttgtttacaaagaagtttttcgcaatgt 1174