Miyakogusa Predicted Gene
- Lj5g3v1811590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1811590.1 tr|G7I519|G7I519_MEDTR Inter-alpha-trypsin
inhibitor heavy chain H3 OS=Medicago truncatula
GN=MTR_1g,89.29,0,VWA_3,NULL; zf-RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; no des,gene.g62390.t1.1
(1927 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81298 similar to UniRef100_A7PI33 Cluster: Chromosome... 1400 0.0
gnl|LJGI|TC61164 similar to UniRef100_A7PI33 Cluster: Chromosome... 597 e-169
gnl|LJGI|TC78771 similar to UniRef100_A7NZL5 Cluster: Chromosome... 70 6e-11
gnl|LJGI|GO023427 similar to UniRef100_A7NZL5 Cluster: Chromosom... 64 3e-09
>gnl|LJGI|TC81298 similar to UniRef100_A7PI33 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1222
Score = 1400 bits (706), Expect = 0.0
Identities = 713/714 (99%), Gaps = 1/714 (0%)
Strand = Plus / Plus
Query: 1 atgaagcaaggatctggccatgctatattcactgcagaatgttcacattcattccatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atgaagcaaggatctggccatgctatattcactgcagaatgttcacattcattccatttc 568
Query: 61 cactgcattgcttcaaatgtgaaacatggaaaccaaatatgtccagtgtgcagagcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cactgcattgcttcaaatgtgaaacatggaaaccaaatatgtccagtgtgcagagcaaag 628
Query: 121 tggaaggaaatacccttatccggcgccagtttggatcctatccagggaagggtttcacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tggaaggaaatacccttatccggcgccagtttggatcctatccagggaagggtttcacct 688
Query: 181 agtcctataaattggccccaaaatgacgctttgatggctgtggtccaccgcctaccttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agtcctataaattggccccaaaatgacgctttgatggctgtggtccaccgcctaccttta 748
Query: 241 ccccatcctcgccgagatttgaataggaggcatattgtgccactttatcaagcttctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ccccatcctcgccgagatttgaataggaggcatattgtgccactttatcaagcttctgaa 808
Query: 301 ccaggtgtattcaatgacgatgaacccttgaatcatcaacctcaacctgcattacctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ccaggtgtattcaatgacgatgaacccttgaatcatcaacctcaacctgcattacctgag 868
Query: 361 agaagcacttcaggtaagagtactgaagatactgattctgttcgagcaatggagattaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 agaagcacttcaggtaagagtactgaagatactgattctgttcgagcaatggagattaaa 928
Query: 421 acgtaccccgaagtgtcagctactccacgggccaaaactcactctaacttcacagttttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 acgtaccccgaagtgtcagctactccacgggccaaaactcactctaacttcacagttttg 988
Query: 481 gttcatctcaaagctactgctgctgcagctgccgagagacaaaaccttagtagaaaccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gttcatctcaaagctactgctgctgcagctgccgagagacaaaaccttagtagaaaccag 1048
Query: 541 gctagcttgacacagatttctcagacaccgcgtgcccctgttgacttggtcactgtgctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 gctagcttgacacagatttctcagacaccgcgtgcccctgttgacttggtcactgtgctt 1108
Query: 601 gatgtcagtggtagcatgagtggaactaagcttgcgctattgaaaagagccat-ggggtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1109 gatgtcagtggtagcatgagtggaactaagcttgcgctattgaaaagagccatgggggtt 1168
Query: 660 tgttatacagaatctaggctctaacgacaggctctctgttattgctttctcttc 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 tgttatacagaatctaggctctaacgacaggctctctgttattgctttctcttc 1222
>gnl|LJGI|TC61164 similar to UniRef100_A7PI33 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 723
Score = 597 bits (301), Expect = e-169
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 1627 catgaccgtctttgcatggcgttggatgctgaactaaaggaaatgcaggaacgaatggtg 1686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catgaccgtctttgcatggcgttggatgctgaactaaaggaaatgcaggaacgaatggtg 60
Query: 1687 agtaggcatgtgtatgaagcatctggaagagcatacatactttccggattgagctcacac 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtaggcatgtgtatgaagcatctggaagagcatacatactttccggattgagctcacac 120
Query: 1747 tcatggcaacgagcaactgcaagaggcgattccacggatcagtcgagccttgttcaggct 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcatggcaacgagcaactgcaagaggcgattccacggatcagtcgagccttgttcaggct 180
Query: 1807 tatcagaccccatcaatggttgagatgcttactcgatctcaggccatgctactaggtagt 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatcagaccccatcaatggttgagatgcttactcgatctcaggccatgctactaggtagt 240
Query: 1867 ccatcaggtcagaggtttctccagccactgttgtcattgagatcacaaccaagcccaagg 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccatcaggtcagaggtttctccagccactgttgtcattgagatcacaaccaagcccaagg 300
Query: 1927 t 1927
|
Sbjct: 301 t 301
>gnl|LJGI|TC78771 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 1035
Score = 69.9 bits (35), Expect = 6e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1480 gaagtggacagacagcgcaaccggctccaagcagctgaggcaatggc 1526
||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 73 gaagttgacagacagcgaaaccggcttcaagcagctgaggcaatggc 119
>gnl|LJGI|GO023427 similar to UniRef100_A7NZL5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 271
Score = 63.9 bits (32), Expect = 3e-09
Identities = 113/140 (80%)
Strand = Plus / Plus
Query: 1018 catgctttcggatttggtgctgatcatgatgcttcatcaatgcactcaatttcagagatc 1077
|||||||| |||||||||||||| ||||||||| | ||||||| ||||| || |||||
Sbjct: 115 catgcttttggatttggtgctgaccatgatgctactgcaatgcattcaatctctgagatt 174
Query: 1078 tccggtggcacattttctttcatcgagactgaagctgtgttgcaggatgcatttgcacaa 1137
| || ||||| || ||||| || || ||||| | | || | |||||||||||||||||
Sbjct: 175 actgggggcacgttctcttttattgaaactgaggatatgattcaggatgcatttgcacag 234
Query: 1138 tgcattggaggacttctgag 1157
|| |||| |||||| ||||
Sbjct: 235 tgtcttgggggacttatgag 254