Miyakogusa Predicted Gene

Lj5g3v1810090.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1810090.1 CUFF.55971.1
         (345 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69455 similar to UniRef100_Q0DXL7 Cluster: Os02g07450...   468   e-131
gnl|LJGI|TC61506 similar to UniRef100_A7PI19 Cluster: Chromosome...    54   6e-07

>gnl|LJGI|TC69455 similar to UniRef100_Q0DXL7 Cluster: Os02g0745000 protein; n=2;
           Oryza sativa Japonica Group|Rep: Os02g0745000 protein -
           Oryza sativa subsp. japonica (Rice), partial (28%)
          Length = 581

 Score =  468 bits (236), Expect = e-131
 Identities = 236/236 (100%)
 Strand = Plus / Plus

                                                                       
Query: 110 tgaagaaggaaagtgttcctgtgaagagacttatcgtcaatcagattcttccaccatctg 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaagaaggaaagtgttcctgtgaagagacttatcgtcaatcagattcttccaccatctg 60

                                                                       
Query: 170 catctgattgcaagttttgttctatgaaaagaaaggatcagacgcgtgctcttgatatga 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  catctgattgcaagttttgttctatgaaaagaaaggatcagacgcgtgctcttgatatga 120

                                                                       
Query: 230 ttcagaatgacccagaactctcctccttattgatgattcaagcaccccttgttgatgtag 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagaatgacccagaactctcctccttattgatgattcaagcaccccttgttgatgtag 180

                                                                   
Query: 290 agataagaggtgttccagctctcaaatttctgggtgacataatttggaaatgatca 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agataagaggtgttccagctctcaaatttctgggtgacataatttggaaatgatca 236


>gnl|LJGI|TC61506 similar to UniRef100_A7PI19 Cluster: Chromosome chr13 scaffold_17,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_17, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (75%)
          Length = 1564

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 168  tgcatctgattgcaagttttgttctatgaaaagaaaggatcagacgcgtgc 218
            |||||| || |||||||||||||| |||||||| |||||||| | ||||||
Sbjct: 1015 tgcatccgactgcaagttttgttcaatgaaaaggaaggatcaaatgcgtgc 1065