Miyakogusa Predicted Gene
- Lj5g3v1807010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1807010.1 Non Chatacterized Hit- tr|I1NHH6|I1NHH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.86,0,OTU,Ovarian
tumour, otubain; SUBFAMILY NOT NAMED,NULL; OTU DOMAIN CONTAINING
PROTEIN,NULL; Cysteine ,CUFF.55963.1
(960 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59844 similar to UniRef100_A7PI16 Cluster: Chromosome... 1090 0.0
gnl|LJGI|TC71129 similar to UniRef100_A7PI15 Cluster: Chromosome... 801 0.0
gnl|LJGI|TC69170 similar to UniRef100_A7NZN2 Cluster: Chromosome... 90 3e-17
>gnl|LJGI|TC59844 similar to UniRef100_A7PI16 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 786
Score = 1090 bits (550), Expect = 0.0
Identities = 561/564 (99%), Gaps = 3/564 (0%)
Strand = Plus / Plus
Query: 1 atgtgttttttcaggaacatggcaacacatgatatggatcctgatgttgttcgctggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atgtgttttttcaggaacatggcaacacatgatatggatcctgatgttgttcgctggggt 282
Query: 61 cttcatctcctggatggttgtacgttttcccatagagcttcgcctagtgttgttactcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttcatctcctggatggttgtacgttttcccatagagcttcgcctagtgttgttactcga 342
Query: 121 tgtgatccggatttaggtcgagttgaatatgttagggaaggcttctgtcagaattcttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgtgatccggatttaggtcgagttgaatatgttagggaaggcttctgtcagaattcttat 402
Query: 181 gtggacgatgatgaggctgttgcgcgtgcttatcaagaagagttgtcgcgacttggttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtggacgatgatgaggctgttgcgcgtgcttatcaagaagagttgtcgcgacttggttcc 462
Query: 241 atggaagcctctgggatgtcaaattttggtaatgagcaagtgggggcgtccgtttatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atggaagcctctgggatgtcaaattttggtaatgagcaagtgggggcgtccgtttatcca 522
Query: 301 ccagactggcttgcttcttcaaatggaaactataactt---tggcaactcttgcgagaac 357
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 523 ccagactggcttgcttcttcaaatggaaactataactttggtggcaactcttgcgagaac 582
Query: 358 tctgtagatgagtcatccagtatgaaagaagtggagaattgtggtccaggtgaaagggaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tctgtagatgagtcatccagtatgaaagaagtggagaattgtggtccaggtgaaagggaa 642
Query: 418 aatgatgggcatgaaaatggaggttttgatccgtcttctgaatcaggagagatgtcttat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aatgatgggcatgaaaatggaggttttgatccgtcttctgaatcaggagagatgtcttat 702
Query: 478 atcagtgatgacttttggcatacattggaaatatcagatgagtcttctcttgatggcgaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 atcagtgatgacttttggcatacattggaaatatcagatgagtcttctcttgatggcgaa 762
Query: 538 gtaggaaaaaggttaaatcagatg 561
||||||||||||||||||||||||
Sbjct: 763 gtaggaaaaaggttaaatcagatg 786
>gnl|LJGI|TC71129 similar to UniRef100_A7PI15 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 715
Score = 801 bits (404), Expect = 0.0
Identities = 424/433 (97%)
Strand = Plus / Plus
Query: 528 tgatggcgaagtaggaaaaaggttaaatcagatggttcccattcctcatatacctaaaaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 tgatggcgaagtaggaaaaaggttaaatcagatggttcccattcctcatattcctaaaac 60
Query: 588 caatatnnnnnnnccatctgatgatgaagaaatatcagatcatcaaaggctgctagacag 647
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caatataaaaataccatctgatgatgaagaaatatcagatcatcaaaggctgctagacag 120
Query: 648 actgcagttatatgagctggttgagtctaaggttgaaggagatggtaactgccagtttcg 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgcagttatatgagctggttgagtctaaggttgaaggagatggtaactgccagtttcg 180
Query: 708 ttctttgtcagatcagctctatcgctctccaaaccaccacaaatttgtgagggagcaaat 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctttgtcagatcagctctatcgctctccaaaccaccacaaatttgtgagggagcaaat 240
Query: 768 tgttgaacagctcaagtcttgcccagaactatatgcgggttatgttcctatggcttatag 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttgaacagctcaagtcttgcccagaactatatgcgggttatgttcctatggcttatag 300
Query: 828 tgattatttgaagaaaatgagcaagagcggtgaatggggagatcatgtcacgttacaggc 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgattatttgaagaaaatgagcaagagcggtgaatggggagatcatgtcacgttacaggc 360
Query: 888 tgctgcagattggtatggtgtcaaaatttttgtgattacatcttttaaggacacatgtta 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctgcagattggtatggtgtcaaaatttttgtgattacatcttttaaggacacatgtta 420
Query: 948 cattgagattctt 960
|||||||||||||
Sbjct: 421 cattgagattctt 433
>gnl|LJGI|TC69170 similar to UniRef100_A7NZN2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (56%)
Length = 1631
Score = 89.7 bits (45), Expect = 3e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 808 tatgttcctatggcttatagtgattatttgaagaaaatgagcaagagcggtgaatgggga 867
|||||||| |||| ||| |||| |||||| |||| |||| |||||| || ||||||||
Sbjct: 1052 tatgttcccatggaatatggtgaatatttggagaagatgaccaagagtggagaatggggt 1111
Query: 868 gatcatgtcacgttacaggctgctgcagattggtatggtgtcaaaatttttgtgattaca 927
||||||||||| | || || |||||||||| |||||||| | ||| |||||||| ||
Sbjct: 1112 gatcatgtcactcttcaagcagctgcagattcatatggtgtgagaatatttgtgatgact 1171
Query: 928 tcttttaaggacacatgttacattgagattctt 960
||||| |||||||| |||| ||| |||||||||
Sbjct: 1172 tctttcaaggacacctgttgcatagagattctt 1204
Score = 52.0 bits (26), Expect = 7e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 609 tgatgaagaaatatcagatcatcaaaggctgctagacagactgcagttatatga 662
|||||||| || ||||||||||||||||| || || ||| |||||||||||||
Sbjct: 869 tgatgaagcaacttcagatcatcaaaggcttctggatagattgcagttatatga 922