Miyakogusa Predicted Gene

Lj5g3v1796850.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1796850.1 gi|1370179|emb|Z73939.1|.path1.1
         (603 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62159 UniRef100_Q40210 Cluster: RAB5B; n=1; Lotus jap...  1195   0.0  

>gnl|LJGI|TC62159 UniRef100_Q40210 Cluster: RAB5B; n=1; Lotus japonicus|Rep: RAB5B -
           Lotus japonicus, complete
          Length = 1225

 Score = 1195 bits (603), Expect = 0.0
 Identities = 603/603 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttgtgggtcttccctaccagatagggattctaggccgtttggacgagacaatcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atgggttgtgggtcttccctaccagatagggattctaggccgtttggacgagacaatcct 295

                                                                       
Query: 61  gagaatggtggaggacaggacgcgaagaatctacgcgtcaagcttgttctcttaggtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gagaatggtggaggacaggacgcgaagaatctacgcgtcaagcttgttctcttaggtgat 355

                                                                       
Query: 121 tccggtgttggtaaaagctgtattgttctgcgatttgttcgtggtcagtttgatccaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tccggtgttggtaaaagctgtattgttctgcgatttgttcgtggtcagtttgatccaaca 415

                                                                       
Query: 181 tccaaggtaactgttggagcttcttttttgtcgcaaacaatagccctgcaagactctaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tccaaggtaactgttggagcttcttttttgtcgcaaacaatagccctgcaagactctaca 475

                                                                       
Query: 241 acagtcaagtttgaaatatgggatactgctggtcaagagaggtatgctgctttggcacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 acagtcaagtttgaaatatgggatactgctggtcaagagaggtatgctgctttggcacca 535

                                                                       
Query: 301 ctctattatcgtggtgcagctgttgcagttattgtctatgatataacaagcccagaatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctctattatcgtggtgcagctgttgcagttattgtctatgatataacaagcccagaatct 595

                                                                       
Query: 361 ttcagcaaagcgcagtactgggttaaggagctacaaaaacatggaaaccctgatatagta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttcagcaaagcgcagtactgggttaaggagctacaaaaacatggaaaccctgatatagta 655

                                                                       
Query: 421 atggcactggttggtaataaagctgatcttcttgagaagcgggaagtggctgttcaggat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atggcactggttggtaataaagctgatcttcttgagaagcgggaagtggctgttcaggat 715

                                                                       
Query: 481 ggcattgactatgcagagaagaatggaatgttttttatagagacatctgcaaagactgca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggcattgactatgcagagaagaatggaatgttttttatagagacatctgcaaagactgca 775

                                                                       
Query: 541 gataatataaatgaactgtttgaggaaattgcgaaaagactccctcgcccaccaactact 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gataatataaatgaactgtttgaggaaattgcgaaaagactccctcgcccaccaactact 835

              
Query: 601 tga 603
           |||
Sbjct: 836 tga 838