Miyakogusa Predicted Gene
- Lj5g3v1796800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1796800.1 Non Chatacterized Hit- tr|I1LCX5|I1LCX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54113
PE,88.29,0,seg,NULL; Sec1,Sec1-like protein; Sec1/munc18-like (SM)
proteins,Sec1-like protein; no description,N,CUFF.55955.1
(1716 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013031 similar to UniRef100_A7PI05 Cluster: Chromosom... 1187 0.0
gnl|LJGI|AW164067 similar to UniRef100_A7PI06 Cluster: Chromosom... 682 0.0
gnl|LJGI|BP050750 similar to UniRef100_Q94KJ7 Cluster: Vacuolar ... 143 4e-33
>gnl|LJGI|GO013031 similar to UniRef100_A7PI05 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 628
Score = 1187 bits (599), Expect = 0.0
Identities = 618/627 (98%)
Strand = Plus / Plus
Query: 623 tgcaagctgaggaaccagttaactcttctgatatggccgtgccagagataaatacagtaa 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgcaagctgaggaaccagttaactcttctgatatggccgtgccagagataaatacagtaa 61
Query: 683 tccttttagatagagaggtggacatggtcactcctttgtgttcccagttaacatatgaag 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tccttttagatagagaggtggacatggtcactcctttgtgttcccagttaacatatgaag 121
Query: 743 ggctacttgatgagtttctgcacatcaacaatggttctgtagagctcgatgcatctatta 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggctacttgatgagtttctgcacatcaacaatggttctgtagagctcgatgcatctatta 181
Query: 803 tgggtcttcaacaagaaggnnnnnnnnctaaagtcccacttaattcaagtgacaagcttt 862
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 182 tgggtcttcaacaagaaggaaaaaaaactaaagtcccacttaattcaagtgacaagcttt 241
Query: 863 taaaggagatacgggatctcaactttgaagttgttgtccagattttgcgccaaaaagcta 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taaaggagatacgggatctcaactttgaagttgttgtccagattttgcgccaaaaagcta 301
Query: 923 catccatgaagcaagactacacagacatgacaactactacacagacagtttcggatttga 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catccatgaagcaagactacacagacatgacaactactacacagacagtttcggatttga 361
Query: 983 aggactttgtgaaaaagctgaactcactgccagagattactaggcacataaatcttgctc 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aggactttgtgaaaaagctgaactcactgccagagattactaggcacataaatcttgctc 421
Query: 1043 agcatctgtcaacattcacatcaaagccttcttttcttgggcagcttgatatggaacata 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agcatctgtcaacattcacatcaaagccttcttttcttgggcagcttgatatggaacata 481
Query: 1103 caattattgaagcccagagctatgatatatgctttgattatattgaagaattaatccata 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caattattgaagcccagagctatgatatatgctttgattatattgaagaattaatccata 541
Query: 1163 agcaggagcctttaacaacagtcttacgccttctaatcctattttctattactaattctg 1222
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 542 agcaggagcctttaacaacagtcttatgccttctaatcctattttctattactaattctg 601
Query: 1223 ggttgccaaagaagcagtttgactatt 1249
|||||||||||||||||||||||||||
Sbjct: 602 ggttgccaaagaagcagtttgactatt 628
>gnl|LJGI|AW164067 similar to UniRef100_A7PI06 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 355
Score = 682 bits (344), Expect = 0.0
Identities = 354/356 (99%), Gaps = 1/356 (0%)
Strand = Plus / Plus
Query: 1274 atggattcgagcacatagcaacactaaataatttagagaaggctggactctttaaaaagc 1333
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggattcgagcacatc-caacactaaataatttagagaaggctggactctttaaaaagc 59
Query: 1334 aggattcaaaaagcaattggcttactataaaacgtaccctgcagcttgtggttgaagacg 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aggattcaaaaagcaattggcttactataaaacgtaccctgcagcttgtggttgaagacg 119
Query: 1394 ttgatacagccaaccccagtgatattgcttacgtcttctctggatatgcaccacttagca 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttgatacagccaaccccagtgatattgcttacgtcttctctggatatgcaccacttagca 179
Query: 1454 ttcgtctggttcagcatgccattcgatctggatggcgtcctgttgaagaaactttgaaac 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttcgtctggttcagcatgccattcgatctggatggcgtcctgttgaagaaactttgaaac 239
Query: 1514 tgctgcctggacctcacttggaaacaagaaggggtggattctcaaatagcccatcattcg 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgctgcctggacctcacttggaaacaagaaggggtggattctcaaatagcccatcattcg 299
Query: 1574 acactttatcaggggtttcaaccagcatagctaaagtacctgatggaaggcgtgcc 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acactttatcaggggtttcaaccagcatagctaaagtacctgatggaaggcgtgcc 355
>gnl|LJGI|BP050750 similar to UniRef100_Q94KJ7 Cluster: Vacuolar protein
sorting-associated protein 33 homolog; n=1; Arabidopsis
thaliana|Rep: Vacuolar protein sorting-associated protein
33 homolog - Arabidopsis thaliana (Mouse-ear cress),
partial (8%)
Length = 488
Score = 143 bits (72), Expect = 4e-33
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 1645 tttgttggaggtgttacctttgcagagatttctgcactaagatttctcagttctcaggaa 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tttgttggaggtgttacctttgcagagatttctgcactaagatttctcagttctcaggaa 429
Query: 1705 agcatggcatat 1716
||||||||||||
Sbjct: 428 agcatggcatat 417