Miyakogusa Predicted Gene

Lj5g3v1791270.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1791270.1 Non Chatacterized Hit- tr|I1L2K6|I1L2K6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,37.69,8e-16,LRR_4,Leucine rich repeat 4; PROKAR_LIPOPROTEIN,NULL;
L domain-like,NULL; no description,NULL; FAMIL,CUFF.55915.1
         (1443 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777122                                                     367   e-100
gnl|LJGI|BP035714 weakly similar to UniRef100_A7P314 Cluster: Ch...    92   1e-17

>gnl|LJGI|AV777122 
          Length = 363

 Score =  367 bits (185), Expect = e-100
 Identities = 185/185 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1259 aggcatgccagcatggggtgaatttgctagagtctaacacaaaaactaagcttttcaatg 1318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363  aggcatgccagcatggggtgaatttgctagagtctaacacaaaaactaagcttttcaatg 304

                                                                        
Query: 1319 ggaatatggaccaaacttcccaattcataagctctatgggaatttctagttgtgctacta 1378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303  ggaatatggaccaaacttcccaattcataagctctatgggaatttctagttgtgctacta 244

                                                                        
Query: 1379 atggcttctggtggatttttctggtagaaatattgatgataggtctattcctaaacactt 1438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243  atggcttctggtggatttttctggtagaaatattgatgataggtctattcctaaacactt 184

                 
Query: 1439 aaata 1443
            |||||
Sbjct: 183  aaata 179


>gnl|LJGI|BP035714 weakly similar to UniRef100_A7P314 Cluster: Chromosome chr1
           scaffold_5, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 376

 Score = 91.7 bits (46), Expect = 1e-17
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                       
Query: 404 ccatccccactggaaactgggagaaactatcaggcagcttagaatcactggagttcagat 463
           ||||||||| |||||||||||| |||||  |||||| |||||||||||| ||||||||||
Sbjct: 332 ccatccccaatggaaactgggaaaaacttgcaggcaccttagaatcacttgagttcagat 273

                                                         
Query: 464 caaacccaggtctcattggaagaattccatcaagttttggggtcct 509
           |||||   ||||| | ||||| ||| || ||||||||||| |||||
Sbjct: 272 caaacaatggtctaactggaaaaatcccttcaagttttggtgtcct 227