Miyakogusa Predicted Gene
- Lj5g3v1774920.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1774920.2 Non Chatacterized Hit- tr|E1ZMW0|E1ZMW0_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,30.65,0.00000000000002,seg,NULL; Putative single-stranded
nucleic acids-bindi,Single-stranded nucleic acid binding R3H;
coi,CUFF.55908.2
(1365 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78336 similar to UniRef100_A7QLJ1 Cluster: Chromosome... 1037 0.0
gnl|LJGI|TC75189 similar to UniRef100_A7QLJ1 Cluster: Chromosome... 926 0.0
gnl|LJGI|AV409840 similar to UniRef100_A7QLJ1 Cluster: Chromosom... 76 6e-13
>gnl|LJGI|TC78336 similar to UniRef100_A7QLJ1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 772
Score = 1037 bits (523), Expect = 0.0
Identities = 526/527 (99%)
Strand = Plus / Plus
Query: 1 atggagggctctgcagaggattccagagcagcaccggagtcatgggaggtcgccgatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggagggctctgcagaggattccagagcagcaccggagtcatgggaggtcgccgatttg 305
Query: 61 gacaaccgcttcaaattgatgctctcatccgacaatcaccacgctgacggtgctactcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gacaaccgcttcaaattgatgctctcatccgacaatcaccacgctgacggtgctactcct 365
Query: 121 tctgctccgcctagtgccggtgccggcgacagcgtctccgatgacatcatcaacaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tctgctccgcctagtgccggtgccggcgacagcgtctccgatgacatcatcaacaaggtt 425
Query: 181 gaccaattcctccgcgacgcgattcagaaccctcgcgaacgcctttcaattttgcgaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaccaattcctccgcgacgcgattcagaaccctcgcgaacgcctttcaattttgcgaatg 485
Query: 241 gagcaagatatcgagaagttcgttcgtgatccgaatcgacagcagctggagtttcagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gagcaagatatcgagaagttcgttcgtgatccgaatcgacagcagctggagtttcagcag 545
Query: 301 ctgccgacgtcctatttgcggttggctgcgcaccggttggctcagcattactcgttgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctgccgacgtcctatttgcggttggctgcgcaccggttggctcagcattactcgttgcag 605
Query: 361 tctatggttttactggacaatagcttaccggatggttccgggtcaagaattattgtccac 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 606 tctatggttttactggacaatagcttaccggatggttccgggtcgagaattattgtccac 665
Query: 421 aagactcctggatgtagtaagcttccttgtattcgactcgctgacattccggtgaaattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aagactcctggatgtagtaagcttccttgtattcgactcgctgacattccggtgaaattg 725
Query: 481 ccgtcggaagacaatgaagtcaggaaggttgctattaaacagagacc 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccgtcggaagacaatgaagtcaggaaggttgctattaaacagagacc 772
>gnl|LJGI|TC75189 similar to UniRef100_A7QLJ1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(32%)
Length = 1070
Score = 926 bits (467), Expect = 0.0
Identities = 467/467 (100%)
Strand = Plus / Plus
Query: 899 gtgaagttgatcgcaatgatcctgattatgacaggaactatgacaggtatatgcaaagat 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaagttgatcgcaatgatcctgattatgacaggaactatgacaggtatatgcaaagat 60
Query: 959 ttgaccccgggtttgggttcaatggtggttcatacaccatgcagccaatgtatacaccag 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaccccgggtttgggttcaatggtggttcatacaccatgcagccaatgtatacaccag 120
Query: 1019 tagtgaattacaacactgagttcccacaacttggagttggatccattcacggaccccagt 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagtgaattacaacactgagttcccacaacttggagttggatccattcacggaccccagt 180
Query: 1079 tttctactgaacaccaaccaggacctctaccacatcatatgcctgggtcatgggctccat 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttctactgaacaccaaccaggacctctaccacatcatatgcctgggtcatgggctccat 240
Query: 1139 catcatcacctgctggaatgggatacggacatccagagaccattttgtcaccatttaatc 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcatcacctgctggaatgggatacggacatccagagaccattttgtcaccatttaatc 300
Query: 1199 ctagtcaagttgctttacgctccccgtcaactttgtatttgcattcatctcaatattctt 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctagtcaagttgctttacgctccccgtcaactttgtatttgcattcatctcaatattctt 360
Query: 1259 ctcagggtcctggaatgccttttatccctcatgaacaccaacccttttcacagtctcatc 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcagggtcctggaatgccttttatccctcatgaacaccaacccttttcacagtctcatc 420
Query: 1319 aacctccgcctgatgcaagttatggattcgcccggccctggtgaagg 1365
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacctccgcctgatgcaagttatggattcgcccggccctggtgaagg 467
>gnl|LJGI|AV409840 similar to UniRef100_A7QLJ1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 417
Score = 75.8 bits (38), Expect = 6e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 168 catcaacaaggttgaccaattcctccgcgacgcgattcagaaccctcgcgaacgcctttc 227
||||||| ||||||| || ||||| | || |||||||| ||||||||||||||||||||
Sbjct: 317 catcaaccaggttgatcagttccttggtgaagcgattcaaaaccctcgcgaacgcctttc 376
Query: 228 aattttgcgaatggagcaagat 249
||||||||| | |||||||||
Sbjct: 377 aattttgcggagtgagcaagat 398
Score = 60.0 bits (30), Expect = 4e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 34 ccggagtcatgggaggtcgccgatttggac 63
||||||||||||||||||||||||||||||
Sbjct: 174 ccggagtcatgggaggtcgccgatttggac 203