Miyakogusa Predicted Gene
- Lj5g3v1772520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1772520.1 Non Chatacterized Hit- tr|I1NHN0|I1NHN0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28897
PE,80.62,0,seg,NULL; ABC2_membrane,ABC-2 type transporter;
PDR_assoc,Plant PDR ABC transporter associated; ABC_,CUFF.55872.1
(4413 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC597437 similar to UniRef100_A7QBG6 Cluster: Chromosom... 1094 0.0
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom... 111 4e-23
gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosom... 111 4e-23
gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromos... 92 4e-17
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 80 1e-13
gnl|LJGI|TC67491 similar to UniRef100_A7P5B6 Cluster: Chromosome... 76 2e-12
gnl|LJGI|AV406931 similar to UniRef100_A7P7M5 Cluster: Chromosom... 70 1e-10
gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable ... 66 2e-09
gnl|LJGI|BE122583 similar to UniRef100_A9TYR6 Cluster: ATP-bindi... 60 1e-07
gnl|LJGI|CB828965 similar to UniRef100_A7QBF4 Cluster: Chromosom... 58 5e-07
gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome... 56 2e-06
>gnl|LJGI|DC597437 similar to UniRef100_A7QBG6 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 573
Score = 1094 bits (552), Expect = 0.0
Identities = 566/568 (99%), Gaps = 2/568 (0%)
Strand = Plus / Plus
Query: 3617 cctactggaggaatccgcagtataatgcaatccggtttttcatggcaatagctgtaggtg 3676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctactggaggaatccgcagtataatgcaatccggtttttcatggcaatagctgtaggtg 60
Query: 3677 ttatttttggactcattttctggagacaaggagaaaaaatacacacggaacaagatctta 3736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatttttggactcattttctggagacaaggagaaaaaatacacacggaacaagatctta 120
Query: 3737 tgaatatcatgggagctatatatgcagctattttctttcttggagcctccaacactgcct 3796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaatatcatgggagctatatatgcagctattttctttcttggagcctccaacactgcct 180
Query: 3797 ctgttcaacctgtcgttgcaatagaaagaacggtcttctaccgtgaaagagcggctggaa 3856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgttcaacctgtcgttgcaatagaaagaacggtcttctaccgtgaaagagcggctggaa 240
Query: 3857 tgtactcagctcttccttatgcatctgctcaggtagcaatggaatgcatttatgttgcaa 3916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtactcagctcttccttatgcatctgctcaggtagcaatggaatgcatttatgttgcaa 300
Query: 3917 tccagacattgtcctatactcttatcctatactcaatgattgggttcatttggcaagctg 3976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccagacattgtcctatactcttatcctatactcaatgattgggttcatttggcaagctg 360
Query: 3977 acaagttcttctggttctactacttcatattcatgtcctttgtctacttcacactttatg 4036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaagttcttctggttctactacttcatattcatgtcctttgtctacttcacactttatg 420
Query: 4037 gaatgatgacattggctctaacaccaaaccaccaaattgctgcaattgttatgtccttct 4096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaatgatgacattggctctaacaccaaaccaccaaattgctgcaattgttatgtccttct 480
Query: 4097 ttctggttttctggaacatattctcgggtttcgttgtcccaaaatcgcaaattcctatat 4156
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 481 ttctggttttctggaacatattctcgggtttcgttgtccc-aaatcgc-aattcctatat 538
Query: 4157 ggtggaggtggtgttactgggcatgccc 4184
||||||||||||||||||||||||||||
Sbjct: 539 ggtggaggtggtgttactgggcatgccc 566
>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 461
Score = 111 bits (56), Expect = 4e-23
Identities = 137/164 (83%)
Strand = Plus / Plus
Query: 3130 atggatgagccgacctcagggctggatgctagagccgcagctattgtaatgcgtactgtc 3189
|||||||| || || ||||| || |||| |||||| ||||||||||| ||| | |||||
Sbjct: 10 atggatgaaccaacttcaggtctagatgttagagcagcagctattgttatgagggctgtc 69
Query: 3190 agaaatacagtagatacaggaagaactgttgtctgcacaattcatcaaccaagcattgac 3249
||||| || || ||||| |||||||| ||||| ||||| ||||| || || ||||||||
Sbjct: 70 agaaacactgtggatactggaagaacagttgtttgcacgattcaccagcctagcattgat 129
Query: 3250 atatttgaagcttttgatgagctgcttttgatgaagagaggagg 3293
|| |||||||| ||||||||||| |||||||||| ||||||||
Sbjct: 130 atctttgaagcctttgatgagctcattttgatgaaaagaggagg 173
>gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 538
Score = 111 bits (56), Expect = 4e-23
Identities = 164/200 (82%)
Strand = Plus / Plus
Query: 1180 gttcatatcatggatgttacaatgataatctctcttttacaacctgcaccagaaacattt 1239
||||||||||||||||| || ||| | || ||||||||||| || |||||||| ||||||
Sbjct: 240 gttcatatcatggatgtaaccatggtgatttctcttttacagccagcaccagagacattt 299
Query: 1240 gagttttttgatgacataatcctactttcagaaggtcagattgtgtaccaaggtccacgt 1299
|| | || || ||||| ||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 300 gaactcttcgacgacattatcctgctttcagaaggtcaaattgtataccaaggtccacga 359
Query: 1300 gagaatgttctcaacttttttgagagtgtgggcttcaaatgccctgaaaggaaaggagtt 1359
||||| || || | ||||||||| |||| ||||| || |||||||| ||||||| |
Sbjct: 360 gagaacgtgctagagttttttgagtacatgggtttcaagtgtcctgaaagaaaaggagct 419
Query: 1360 gcagattttttacaggaagt 1379
|| || ||| |||| |||||
Sbjct: 420 gctgactttctacaagaagt 439
>gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 553
Score = 91.7 bits (46), Expect = 4e-17
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 3112 aatccttctattatctttatggatgagccgacctcagggctggatgctagagccgcagct 3171
|||||||| || || || |||||||| || || ||||| || ||||| ||||| |||||
Sbjct: 285 aatccttcaatcattttcatggatgaaccaacttcaggcctcgatgcaagagcagcagcc 344
Query: 3172 attgtaatgcgtactgtcagaaatacagtagatacaggaagaactgttgtctgcacaatt 3231
||||| ||| | || || ||||| || || || || ||||| || |||||||||||||||
Sbjct: 345 attgttatgaggacagtgagaaacactgttgacactggaaggacagttgtctgcacaatt 404
Query: 3232 catcaaccaagcattgacatatttgaagcttttgatgagctgcttttgatgaagagagga 3291
|| ||||| || ||||| || |||||||| |||||||||||| | || |||||||||||
Sbjct: 405 caccaacctagtattgatatctttgaagcctttgatgagctgttgctgttgaagagagga 464
Query: 3292 gg 3293
||
Sbjct: 465 gg 466
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 79.8 bits (40), Expect = 1e-13
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 3205 acaggaagaactgttgtctgcacaattcatcaaccaagcattgacatatttgaagctttt 3264
||||||||||| ||||| ||||| || || ||||| ||||||||||| ||||||||||||
Sbjct: 32 acaggaagaacagttgtatgcaccatccaccaacctagcattgacatttttgaagctttt 91
Query: 3265 gatgagct 3272
||||||||
Sbjct: 92 gatgagct 99
>gnl|LJGI|TC67491 similar to UniRef100_A7P5B6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 678
Score = 75.8 bits (38), Expect = 2e-12
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 466 aatggaaccagagcacttcccacacttgtgaattccaccatgaatgcgatagag 519
||||||||||||||||| || |||||||||||||||||| ||||||| ||||||
Sbjct: 544 aatggaaccagagcactgccaacacttgtgaattccaccgtgaatgcaatagag 597
>gnl|LJGI|AV406931 similar to UniRef100_A7P7M5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 425
Score = 69.9 bits (35), Expect = 1e-10
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 1328 tgggcttcaaatgccctgaaaggaaaggagttgcagattttttacaggaagttacttcaa 1387
||||||||||||| ||||| |||||||| | ||| || ||| | |||||||| |||||||
Sbjct: 165 tgggcttcaaatgtcctgagaggaaaggtgctgctgactttcttcaggaagtaacttcaa 224
Query: 1388 gaaaggaccaagaacagtactgg 1410
||||| |||||||||||||||
Sbjct: 225 agaaggatcaagaacagtactgg 247
>gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable pleiotropic drug
resistance protein 3; n=1; Arabidopsis thaliana|Rep:
Probable pleiotropic drug resistance protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 424
Score = 65.9 bits (33), Expect = 2e-09
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 2770 atggatgttcttgctggaagaaaaactggtggttatattga 2810
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 180 atggatgttcttgctggaagaaaaactggaggatatattga 140
>gnl|LJGI|BE122583 similar to UniRef100_A9TYR6 Cluster: ATP-binding cassette
transporter, subfamily G, member 22, group PDR protein
PpABCG22; n=1; Physcomitrella patens subsp. patens|Rep:
ATP-binding cassette transporter, subfamily G, member 22,
group PDR protein PpABCG22 - Physcomitrella patens subsp.
patens, partial (3%)
Length = 320
Score = 60.0 bits (30), Expect = 1e-07
Identities = 94/114 (82%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 2605 cttgcttttgatcacgtgaattactacatcgatatgcctgctgaaatgaaaaaacaagga 2664
||||||||||| | |||||||| |||||||| ||||| ||||||||| ||||||||
Sbjct: 193 cttgcttttgaaaatgtgaattattacatcgagatgccaaatgaaatgaagaaacaagg- 251
Query: 2665 gttaaagagagtcggctccaattactaagagatgtcagtggtgctttcaggcct 2718
|| |||||| | | |||||| | ||||||||| | | ||||||||||||||||
Sbjct: 252 tttcaagagaatagactccaacttctaagagatataaatggtgctttcaggcct 305
>gnl|LJGI|CB828965 similar to UniRef100_A7QBF4 Cluster: Chromosome chr13 scaffold_74,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_74, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 436
Score = 58.0 bits (29), Expect = 5e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 4104 tttctggaacatattctcgggtttcgttgtcccaaaatcgcaaattcctatatggtggag 4163
|||||||||| | ||||| || || || |||||| | |||||||||| |||||||||||
Sbjct: 3 tttctggaacctcttctctggatttcttatcccaagaacgcaaattccaatatggtggag 62
Query: 4164 gtggtgttactgggcat 4180
||||| ||| |||||||
Sbjct: 63 gtggtattattgggcat 79
>gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1481
Score = 56.0 bits (28), Expect = 2e-06
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 3208 ggaagaactgttgtctgcacaattcatcaaccaagcattgacatatttgaagcttttgat 3267
|||||||||||| ||||| ||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 152 ggaagaactgttacatgcactattcaccaaccaagtattgatatatttgaggcatttgat 211
Query: 3268 gagctgcttttgatgaagagaggaggacaaat 3299
||| || || | ||||| | |||||||||||
Sbjct: 212 gaggtgattcttatgaaaactggaggacaaat 243