Miyakogusa Predicted Gene

Lj5g3v1770480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1770480.1 tr|C1EDU6|C1EDU6_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,46.81,0.000000000000002,Kelch motif,NULL; PREDICTED
PROTEIN,NULL; KELCH REPEAT DOMAIN,NULL; no description,Kelch-type beta
p,CUFF.55871.1
         (363 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76708 similar to UniRef100_Q10AZ7 Cluster: Kelch moti...   648   0.0  
gnl|LJGI|GO010485 homologue to UniRef100_A7QBH1 Cluster: Chromos...    52   2e-06

>gnl|LJGI|TC76708 similar to UniRef100_Q10AZ7 Cluster: Kelch motif family protein,
           expressed; n=1; Oryza sativa Japonica Group|Rep: Kelch
           motif family protein, expressed - Oryza sativa subsp.
           japonica (Rice), partial (42%)
          Length = 737

 Score =  648 bits (327), Expect = 0.0
 Identities = 330/331 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcattactgggttagagcaacatcttctgatttcgccggaactcttccccaacctcgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  atgcattactgggttagagcaacatcttctgatttcgccggaactcttccccaacctcgg 154

                                                                       
Query: 61  agtggtcattccgctgttaacatcggcaaatccaaggttgtcgtgtttggtggccttgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 agtggtcattccgctgttaacatcggcaaatccaaggttgtcgtgtttggtggccttgtc 214

                                                                       
Query: 121 gataagaagtttctcagcgacatcgttgtctatgatattgaggccaagctatggtttcag 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 215 gataagaagtttctcagcgacatcgctgtctatgatattgaggccaagctatggtttcag 274

                                                                       
Query: 181 ccagagtgcacaggaagtggtggttcagatggccatgtgggtcccaccccacgggcattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccagagtgcacaggaagtggtggttcagatggccatgtgggtcccaccccacgggcattc 334

                                                                       
Query: 241 catgttgctgttgccattgattgtcacatgttcatttttggtggccgttatgggagccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 catgttgctgttgccattgattgtcacatgttcatttttggtggccgttatgggagccaa 394

                                          
Query: 301 aggttgggggacttttgggttttggatactg 331
           |||||||||||||||||||||||||||||||
Sbjct: 395 aggttgggggacttttgggttttggatactg 425


>gnl|LJGI|GO010485 homologue to UniRef100_A7QBH1 Cluster: Chromosome chr13
           scaffold_74, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_74, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 774

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 302 ggttgggggacttttgggttttggatactg 331
           |||||||||||||||||||| |||||||||
Sbjct: 672 ggttgggggacttttgggttctggatactg 701