Miyakogusa Predicted Gene

Lj5g3v1769400.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1769400.1 tr|Q5N8V3|Q5N8V3_ORYSJ Auxin-regulated
protein-like OS=Oryza sativa subsp. japonica GN=P0035F12.18
P,57.5,2e-18,OTU,Ovarian tumour, otubain; Cysteine proteinases,NULL;
SUBFAMILY NOT NAMED,NULL; OTU DOMAIN CONTAIN,CUFF.55865.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS346060 similar to UniRef100_A7QBI6 Cluster: Chromosom...   567   e-161
gnl|LJGI|TC72433 similar to UniRef100_A7QBI6 Cluster: Chromosome...    86   2e-16

>gnl|LJGI|FS346060 similar to UniRef100_A7QBI6 Cluster: Chromosome chr13 scaffold_74,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_74, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 572

 Score =  567 bits (286), Expect = e-161
 Identities = 286/286 (100%)
 Strand = Plus / Minus

                                                                       
Query: 36  ggaagaattgttgaataggcgtgaggaaactgaatggtttatagaaggagactttgattt 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggaagaattgttgaataggcgtgaggaaactgaatggtttatagaaggagactttgattt 513

                                                                       
Query: 96  atatgtgacaagaatgcaaaaaccttgtgtctggggtggggaacctgagatattgatggc 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atatgtgacaagaatgcaaaaaccttgtgtctggggtggggaacctgagatattgatggc 453

                                                                       
Query: 156 ttctcatgttttgaagactccaatatctgtattcatgagagatacaagctctactgagat 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttctcatgttttgaagactccaatatctgtattcatgagagatacaagctctactgagat 393

                                                                       
Query: 216 agtaaacatagcaaagtatggtgaagaatataggaatggtaaagatatttccatcaacgt 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agtaaacatagcaaagtatggtgaagaatataggaatggtaaagatatttccatcaacgt 333

                                                         
Query: 276 gttatttcacgggtatggacactatgagatactagagacctgaccc 321
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gttatttcacgggtatggacactatgagatactagagacctgaccc 287


>gnl|LJGI|TC72433 similar to UniRef100_A7QBI6 Cluster: Chromosome chr13 scaffold_74,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_74, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 815

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 1   atggaactggctgatgagttgagggctaaggttgcggaagaat 43
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 atggaactggctgatgagttgagggctaaggttgcggaagaat 815