Miyakogusa Predicted Gene
- Lj5g3v1749270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1749270.1 Non Chatacterized Hit- tr|I3T5B9|I3T5B9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,77.39,0,diverge_rpsU: rpsU-divergently transcribed
protein,Ubiquinone biosynthesis protein COQ9; GB DEF: T29,CUFF.55853.1
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73131 similar to UniRef100_Q94BU3 Cluster: T29M8.1/T2... 462 e-129
gnl|LJGI|TC74676 similar to UniRef100_A7PDT8 Cluster: Chromosome... 436 e-121
gnl|LJGI|DC599702 similar to UniRef100_Q5JL96 Cluster: Zinc fing... 190 1e-47
gnl|LJGI|TC79944 similar to UniRef100_A7PDT8 Cluster: Chromosome... 190 1e-47
>gnl|LJGI|TC73131 similar to UniRef100_Q94BU3 Cluster: T29M8.1/T29M8.1; n=1;
Arabidopsis thaliana|Rep: T29M8.1/T29M8.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (46%)
Length = 490
Score = 462 bits (233), Expect = e-129
Identities = 236/237 (99%)
Strand = Plus / Plus
Query: 228 atcatcatcgacgggtgaagatttccggcgccaagagaccccgaaacctggagccaagta 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atcatcatcgacgggtgaagatttccggcgccaagagaccccgaaacctggagccaagta 313
Query: 288 cgaggacgaacaagctcgcctgctttccgcctcggtcacccacgttttgaaattggggtg 347
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 314 cgaggacgaacaagctcgcctgctttccgcctcggtcactcacgttttgaaattggggtg 373
Query: 348 gacggaagcagcgttaattgctggagcaaaagatgttggtctgtccccttctatcgttgg 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gacggaagcagcgttaattgctggagcaaaagatgttggtctgtccccttctatcgttgg 433
Query: 408 atctttgccgaggaaggaagcagcattggttgagtttttcatggatgactgcttaca 464
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atctttgccgaggaaggaagcagcattggttgagtttttcatggatgactgcttaca 490
Score = 383 bits (193), Expect = e-105
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atgtaccgaacggcggcgaagcggttgttaaccgctgcaaggcactacaactcaaacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 atgtaccgaacggcggcgaagcggttgttaaccgctgcaaggcactacaactcaaacact 86
Query: 61 gggctccgattccggcgtcctcagtcgctgatagcctcttatcggttctccacatcggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gggctccgattccggcgtcctcagtcgctgatagcctcttatcggttctccacatcggag 146
Query: 121 actcaaccactctctgatccacactctaccaatcccatctacaccaccgaaacccctatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 actcaaccactctctgatccacactctaccaatcccatctacaccaccgaaacccctatc 206
Query: 181 atcgtagattcca 193
|||||||||||||
Sbjct: 207 atcgtagattcca 219
>gnl|LJGI|TC74676 similar to UniRef100_A7PDT8 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 458
Score = 436 bits (220), Expect = e-121
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 714 gcgcactatccttggagggatatactcaaccactgagatttatatgctgacagatagctc 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgcactatccttggagggatatactcaaccactgagatttatatgctgacagatagctc 60
Query: 774 tcctgattttcgggatacatggtcttttttggatgctcgagtgaaagatgcttttgatct 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgattttcgggatacatggtcttttttggatgctcgagtgaaagatgcttttgatct 120
Query: 834 aaagaaaacccttcaagaggcacagtatttagcagaagctgttagtgctgggctggggaa 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagaaaacccttcaagaggcacagtatttagcagaagctgttagtgctgggctggggaa 180
Query: 894 ctcctttcaagggtttgttgggaaagttttccggagataa 933
||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcctttcaagggtttgttgggaaagttttccggagataa 220
>gnl|LJGI|DC599702 similar to UniRef100_Q5JL96 Cluster: Zinc finger protein ZFP-like;
n=1; Oryza sativa Japonica Group|Rep: Zinc finger
protein ZFP-like - Oryza sativa subsp. japonica (Rice),
partial (9%)
Length = 582
Score = 190 bits (96), Expect = 1e-47
Identities = 132/144 (91%)
Strand = Plus / Plus
Query: 298 caagctcgcctgctttccgcctcggtcacccacgttttgaaattggggtggacggaagca 357
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 62 caagctcgcctgctttccgcctcggtcacccacgttttaaaattgggatggacggaaatg 121
Query: 358 gcgttaattgctggagcaaaagatgttggtctgtccccttctatcgttggatctttgccg 417
|| | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 122 gcactgattgctggagcaaaggatgttggtctgtccccttctatcgttggttctttgccg 181
Query: 418 aggaaggaagcagcattggttgag 441
|||||||||||| || ||||||||
Sbjct: 182 aggaaggaagcaacactggttgag 205
>gnl|LJGI|TC79944 similar to UniRef100_A7PDT8 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1167
Score = 190 bits (96), Expect = 1e-47
Identities = 132/144 (91%)
Strand = Plus / Plus
Query: 298 caagctcgcctgctttccgcctcggtcacccacgttttgaaattggggtggacggaagca 357
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 204 caagctcgcctgctttccgcctcggtcacccacgttttaaaattgggatggacggaaatg 263
Query: 358 gcgttaattgctggagcaaaagatgttggtctgtccccttctatcgttggatctttgccg 417
|| | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 gcactgattgctggagcaaaggatgttggtctgtccccttctatcgttggttctttgccg 323
Query: 418 aggaaggaagcagcattggttgag 441
|||||||||||| || ||||||||
Sbjct: 324 aggaaggaagcaacactggttgag 347