Miyakogusa Predicted Gene

Lj5g3v1723820.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1723820.1 tr|B6K694|B6K694_SCHJY U4/U6 X U5 tri-snRNP
complex subunit Dim1 OS=Schizosaccharomyces japonicus
(s,38.97,2e-19,Thioredoxin-like,Thioredoxin-like fold; DIM1,mRNA
splicing factor, thioredoxin-like U5 snRNP; THIORE,CUFF.56258.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72299 similar to UniRef100_A7QKT3 Cluster: Chromosome...   402   e-112
gnl|LJGI|BW622586 similar to UniRef100_A7QKT3 Cluster: Chromosom...   331   2e-90
gnl|LJGI|AW719343 UniRef100_A7QKT3 Cluster: Chromosome undetermi...   115   2e-25

>gnl|LJGI|TC72299 similar to UniRef100_A7QKT3 Cluster: Chromosome undetermined
           scaffold_114, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (47%)
          Length = 477

 Score =  402 bits (203), Expect = e-112
 Identities = 212/215 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaattacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgagttacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 322

                                                                       
Query: 61  accattgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 accatcgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 382

                                                                       
Query: 121 ctcgatcaaattttttctaaagcagcaagggatgtgtccaagtttgcaacagtggcactg 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctcgatcaaattctttctaaagcagcaagggatgtgtccaagtttgcaacagtggcactg 442

                                              
Query: 181 gttgatgttgattccccagacattcaagtctatgt 215
           |||||||||||||||||||||||||||||||||||
Sbjct: 443 gttgatgttgattccccagacattcaagtctatgt 477


>gnl|LJGI|BW622586 similar to UniRef100_A7QKT3 Cluster: Chromosome undetermined
           scaffold_114, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (39%)
          Length = 485

 Score =  331 bits (167), Expect = 2e-90
 Identities = 176/179 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaattacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atgagttacatgttaacaacgttgtcgaagaagaaagaagtggattccatcatcagagac 366

                                                                       
Query: 61  accattgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 accatcgataaggtccttgtcctccgctttggtcgtgcctctgaccctgtctgtctccag 426

                                                                      
Query: 121 ctcgatcaaattttttctaaagcagcaagggatgtgtccaagtttgcaacagtggcact 179
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctcgatcaaattctttctaaagcagcaagggatgtgtccaagtttgcaacagtggcact 485


>gnl|LJGI|AW719343 UniRef100_A7QKT3 Cluster: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_114, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 293

 Score =  115 bits (58), Expect = 2e-25
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                     
Query: 402 cccgctcccacctgaacgtataccaaaataccaattactgtaccagggtgtctaaaac 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cccgctcccacctgaacgtataccaaaataccaattactgtaccagggtgtctaaaac 58