Miyakogusa Predicted Gene

Lj5g3v1712580.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1712580.1 Non Chatacterized Hit- tr|I1KVH4|I1KVH4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4397
PE=,93.22,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; WD40
repeat-like,WD40-rep,NODE_11559_length_2619_cov_311.086670.path2.1
         (1461 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP073626 homologue to UniRef100_Q9LMQ9 Cluster: F7H2.9 ...   272   6e-72
gnl|LJGI|AV407693 similar to UniRef100_A7QQ63 Cluster: Chromosom...   250   2e-65
gnl|LJGI|AV410408 similar to UniRef100_A7PF76 Cluster: Chromosom...    58   2e-07

>gnl|LJGI|BP073626 homologue to UniRef100_Q9LMQ9 Cluster: F7H2.9 protein; n=1;
            Arabidopsis thaliana|Rep: F7H2.9 protein - Arabidopsis
            thaliana (Mouse-ear cress), partial (9%)
          Length = 310

 Score =  272 bits (137), Expect = 6e-72
 Identities = 268/309 (86%), Gaps = 2/309 (0%)
 Strand = Plus / Plus

                                                                        
Query: 769  gtttattctgtctgcccacattacaaagagaacattcagttcatcttttcaacagcatta 828
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||| || ||||  
Sbjct: 2    gtttattctgtctgcccgcattataaagaaaacattcagttcatcttttccacggcatgg 61

                                                                        
Query: 829  gatggaaaaataaaagcatggttgtatgacaatttgggatctcgcgttgattatgatgct 888
            |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| 
Sbjct: 62   gatggaaagataaaagcatggttgtatgacaatatgggatctcgtgttgattatgatgca 121

                                                                        
Query: 889  cctggtcgatggtgcacaaccatggcttacagtgctgatggtacaaggctcttttcatgt 948
            || || ||  ||||  |||| ||||| || |||||||||||| |||||||||||||||||
Sbjct: 122  cccggccgtgggtgttcaactatggcctatagtgctgatggttcaaggctcttttcatgt 181

                                                                        
Query: 949  ggaacaagcaaagagggggaatcctctattgtggagtggaacgaaagtgaaggagctgta 1008
            ||||| ||||| || ||||||||  ||||||| || ||||| ||||| ||||||||| | 
Sbjct: 182  ggaactagcaaggatggggaatctgctattgttgaatggaatgaaagcgaaggagctttg 241

                                                                        
Query: 1009 aaaaggacttatcaagg-attccgtaagcgatctat-gggtgttgtgcaatttgatacta 1066
            |||||||||||||||||  || || || |||||| | ||||||||| ||||||||||| |
Sbjct: 242  aaaaggacttatcaaggcttttcgaaaacgatctttggggtgttgtacaatttgatacaa 301

                     
Query: 1067 ccaaaaacc 1075
            |||||||||
Sbjct: 302  ccaaaaacc 310


>gnl|LJGI|AV407693 similar to UniRef100_A7QQ63 Cluster: Chromosome undetermined
            scaffold_141, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_141, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (12%)
          Length = 429

 Score =  250 bits (126), Expect = 2e-65
 Identities = 142/146 (97%), Gaps = 1/146 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1316 cagaagccttggcaaagcctacaataaatccaatttctgctgcggctgcggctggaacta 1375
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1    cagaagccttggcaaagcctacaataaatccaatttctgctgcggctgcggctgcaacta 60

                                                                        
Query: 1376 gtgctgcacttgcagagagagcctcctctgtagtaagcttttactggaatgaatggggat 1435
            ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||
Sbjct: 61   gtgctgcacttgcagagagagcctcatctgtagt-agctattactggaatgaatggggat 119

                                      
Query: 1436 ccccgaaacttgggcgacgttaaacc 1461
            ||||||||||||||||||||||||||
Sbjct: 120  ccccgaaacttgggcgacgttaaacc 145


>gnl|LJGI|AV410408 similar to UniRef100_A7PF76 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 418

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1045 ggtgttgtgcaatttgatactaccaaaaaccgatttttggctgctggtgatga 1097
            |||||||| ||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 110  ggtgttgtacaatttgataccaccaagaatcgattcttagctgctggtgatga 162