Miyakogusa Predicted Gene

Lj5g3v1699200.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1699200.1 Non Chatacterized Hit- tr|I1LCN7|I1LCN7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8642
PE=,97.05,0,COATOMER ALPHA SUBUNIT,NULL; COATOMER,NULL;
Coatomer_WDAD,Coatomer, WD associated
region,NODE_57458_length_931_cov_287.438232.path2.1
         (711 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75611 UniRef100_Q70I39 Cluster: Coatomer alpha subuni...   862   0.0  

>gnl|LJGI|TC75611 UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like protein; n=1;
            Lotus japonicus|Rep: Coatomer alpha subunit-like protein
            - Lotus japonicus, complete
          Length = 4025

 Score =  862 bits (435), Expect = 0.0
 Identities = 642/711 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggaaaatgttgctttgctcagcaaacatgccattataattgctagcaagaagcttgtg 60
            ||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||| |||
Sbjct: 1513 atggaaagtgttgctttgctcagcaaacatgcaattgttattgctagcaagaagctcgtg 1572

                                                                        
Query: 61   caccaatgcactctccacgagacaatccgtgtaaagagtggagcatgggatgacaatggt 120
            ||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 1573 caccaatgcaccctccatgagacaatccgtgtaaaaagtggagcctgggatgaaaatggc 1632

                                                                        
Query: 121  gttttcatttacacaacactaaatcacatcaaatactgtcttcctaatggagataatggc 180
            ||||| |||||||||||| ||||||| |||||||| || || || |||||||||| ||| 
Sbjct: 1633 gtttttatttacacaacattaaatcatatcaaatattgcctccccaatggagatagtggg 1692

                                                                        
Query: 181  ataataaaaactctggacattccaatttatatcacaaaggtttctggaaacacaatcttc 240
            |||||||||||  ||||  | |||||||| ||||||||||||  ||||||||| ||||||
Sbjct: 1693 ataataaaaacattggatgtcccaatttacatcacaaaggttgttggaaacaccatcttc 1752

                                                                        
Query: 241  tgcttggatcgggatggaaagagcagaacaataattattgacgcaactgaatatattttc 300
            ||||||| |||||||||||||| |||| | |||| |||||| |||||||||||| | || 
Sbjct: 1753 tgcttgggtcgggatggaaagaacagagctataactattgatgcaactgaatatgtcttt 1812

                                                                        
Query: 301  aagctttccctcttgaagaaaagatatgaccatgttatgaacatgataaggaactcacag 360
            ||||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1813 aagctttccttgttgaagaaaaggtatgaccatgtgatgaacatgataaggaactcacag 1872

                                                                        
Query: 361  ctttgcgggcaggctatgattgcttatctacaacagaagggatttcctgaggttgccctg 420
            ||||| |||||||||||||||||||||||||||||||| || || |||||||||||||| 
Sbjct: 1873 ctttgtgggcaggctatgattgcttatctacaacagaaagggttccctgaggttgccctc 1932

                                                                        
Query: 421  cattttgtgaaagatgagagaattcggttcaatttggctttagagagtggcaacatccaa 480
            ||||||||||||||||||||||||||||||||||||||| |||| ||||| || || |||
Sbjct: 1933 cattttgtgaaagatgagagaattcggttcaatttggctatagaaagtgggaatattcaa 1992

                                                                        
Query: 481  attgcagttgcatctgctacagcaattgatgagaaagatcactggtatcgattaggggtt 540
            ||||||||||| || |||||||||||||||||||||||||||||||| ||  ||||| ||
Sbjct: 1993 attgcagttgcgtcagctacagcaattgatgagaaagatcactggtaccgtctagggatt 2052

                                                                        
Query: 541  gaggctcttcgccaaggcaatgctggtatagtagagtatgcataccagagaaccaaaaat 600
            || |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 2053 gaagctcttcgtcaaggcaatgctgggatagtagagtatgcataccagaggaccaaaaat 2112

                                                                        
Query: 601  tttgagagattgtctttcctttatctcataactggtaacaaggagaaactatcaaaaatg 660
            |||||||||||||||||||||||||| || ||||||||   ||||||||| ||||| |||
Sbjct: 2113 tttgagagattgtctttcctttatcttattactggtaatgtggagaaactttcaaagatg 2172

                                                               
Query: 661  ttgaaaattgctgaagtcaagaatgatgtgatgggccagtttcacaatgcc 711
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2173 ttgaaaattgctgaagtcaagaatgatgtgatgggccagtttcacaatgcc 2223