Miyakogusa Predicted Gene
- Lj5g3v1699150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1699150.1 tr|Q70I39|Q70I39_LOTJA Coatomer alpha
subunit-like protein OS=Lotus japonicus PE=4
SV=1,88.89,0,COATOMER,NULL; COPI_C,Coatomer, alpha subunit,
C-terminal; coiled-coil,NULL,
NODE_21365_length_635_cov_453.757477.path2.1
(354 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79778 similar to UniRef100_Q70I39 Cluster: Coatomer a... 702 0.0
gnl|LJGI|TC71175 homologue to UniRef100_Q70I39 Cluster: Coatomer... 295 9e-80
gnl|LJGI|TC75611 UniRef100_Q70I39 Cluster: Coatomer alpha subuni... 240 5e-63
gnl|LJGI|TC70183 homologue to UniRef100_Q70I39 Cluster: Coatomer... 78 4e-14
>gnl|LJGI|TC79778 similar to UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like
protein; n=1; Lotus japonicus|Rep: Coatomer alpha
subunit-like protein - Lotus japonicus, partial (39%)
Length = 1849
Score = 702 bits (354), Expect = 0.0
Identities = 354/354 (100%)
Strand = Plus / Plus
Query: 1 atgactgtctgcttcaggtcaaagaaccttgcttctgctgcgaactttgccaggcggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 atgactgtctgcttcaggtcaaagaaccttgcttctgctgcgaactttgccaggcggctg 1156
Query: 61 cttgagacaagtcctaccattgaaaaccaagctaagcaagcaaggcaagtgctggcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 cttgagacaagtcctaccattgaaaaccaagctaagcaagcaaggcaagtgctggcagct 1216
Query: 121 gccgaaagaaatatgactgatgccacagagctgaactatgatttccggaacccatttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 gccgaaagaaatatgactgatgccacagagctgaactatgatttccggaacccatttgta 1276
Query: 181 atctgtggtgcgacatatgtgccaatctaccgaggacagaaggatgtctcttgcccatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 atctgtggtgcgacatatgtgccaatctaccgaggacagaaggatgtctcttgcccatat 1336
Query: 241 tgcacatctcgttttgtgccaagccaggaggcgcagctatgtactgtttgtgaccttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 tgcacatctcgttttgtgccaagccaggaggcgcagctatgtactgtttgtgaccttgct 1396
Query: 301 gtggtaggagcagatgcttctggactactctgttcaccttcccagaaacgctga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 gtggtaggagcagatgcttctggactactctgttcaccttcccagaaacgctga 1450
>gnl|LJGI|TC71175 homologue to UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like
protein; n=1; Lotus japonicus|Rep: Coatomer alpha
subunit-like protein - Lotus japonicus, partial (4%)
Length = 574
Score = 295 bits (149), Expect = 9e-80
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 206 tctaccgaggacagaaggatgtctcttgcccatattgcacatctcgttttgtgccaagcc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tctaccgaggacagaaggatgtctcttgcccatattgcacatctcgttttgtgccaagcc 63
Query: 266 aggaggcgcagctatgtactgtttgtgaccttgctgtggtaggagcagatgcttctggac 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aggaggcgcagctatgtactgtttgtgaccttgctgtggtaggagcagatgcttctggac 123
Query: 326 tactctgttcaccttcccagaaacgctga 354
|||||||||||||||||||||||||||||
Sbjct: 124 tactctgttcaccttcccagaaacgctga 152
>gnl|LJGI|TC75611 UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like protein; n=1;
Lotus japonicus|Rep: Coatomer alpha subunit-like protein
- Lotus japonicus, complete
Length = 4025
Score = 240 bits (121), Expect = 5e-63
Identities = 286/341 (83%)
Strand = Plus / Plus
Query: 1 atgactgtctgcttcaggtcaaagaaccttgcttctgctgcgaactttgccaggcggctg 60
||||||||||||| || | | |||||||| || | ||||| |||||||||||| |||||
Sbjct: 3313 atgactgtctgctacaaggccaagaacctcgccaccgctgcaaactttgccaggaggctg 3372
Query: 61 cttgagacaagtcctaccattgaaaaccaagctaagcaagcaaggcaagtgctggcagct 120
|||||||| | |||| ||||||||||||||||||| |||||||||||| || ||||||
Sbjct: 3373 cttgagaccaaccctaacattgaaaaccaagctaagacagcaaggcaagttctagcagct 3432
Query: 121 gccgaaagaaatatgactgatgccacagagctgaactatgatttccggaacccatttgta 180
|| |||| || ||||||||||| |||||| ||||||| |||||||| || ||||||||
Sbjct: 3433 gcagaaaagaacatgactgatgcaacagagttgaactacgatttccgaaatccatttgtt 3492
Query: 181 atctgtggtgcgacatatgtgccaatctaccgaggacagaaggatgtctcttgcccatat 240
|| || || | || |||||||| || || || |||||||||||||| |||||||||||
Sbjct: 3493 atttgcggatcaacctatgtgcccatttatcgtggacagaaggatgtttcttgcccatac 3552
Query: 241 tgcacatctcgttttgtgccaagccaggaggcgcagctatgtactgtttgtgaccttgct 300
||||| || |||||||||||||||||||||| ||||||||| |||| ||||| || |
Sbjct: 3553 tgcacttcccgttttgtgccaagccaggagggtcagctatgtgctgtgtgtgatctctca 3612
Query: 301 gtggtaggagcagatgcttctggactactctgttcaccttc 341
|||||||| || |||||||||||| | |||||||| |||||
Sbjct: 3613 gtggtaggtgctgatgcttctggattgctctgttctccttc 3653
>gnl|LJGI|TC70183 homologue to UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like
protein; n=1; Lotus japonicus|Rep: Coatomer alpha
subunit-like protein - Lotus japonicus, partial (8%)
Length = 953
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 316 gcttctggactactctgttcaccttcccagaaacgctga 354
|||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcttctggactactctgttcaccttcccagaaacgctga 543