Miyakogusa Predicted Gene

Lj5g3v1699060.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1699060.1 tr|B9HL62|B9HL62_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_765223 PE=4
SV=1,61.54,0.09,seg,NULL,CUFF.55792.1
         (598 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AW164151 similar to UniRef100_Q9LSN6 Cluster: Arabidops...    74   1e-12

>gnl|LJGI|AW164151 similar to UniRef100_Q9LSN6 Cluster: Arabidopsis thaliana genomic
           DNA, chromosome 3, TAC clone:K14A17; n=1; Arabidopsis
           thaliana|Rep: Arabidopsis thaliana genomic DNA,
           chromosome 3, TAC clone:K14A17 - Arabidopsis thaliana
           (Mouse-ear cress), partial (11%)
          Length = 272

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 562 tcaggatccgggtctggatggggaggaaatcattgag 598
           |||||||||||||||||||||||||||||||||||||
Sbjct: 34  tcaggatccgggtctggatggggaggaaatcattgag 70