Miyakogusa Predicted Gene
- Lj5g3v1699010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1699010.1 Non Chatacterized Hit- tr|I1LCM6|I1LCM6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55222
PE,85.77,0,SUBFAMILY NOT NAMED,NULL; MALATE DEHYDROGENASE,Malate
dehydrogenase, type 2; NAD(P)-binding
Rossmann,NODE_34460_length_747_cov_364.220886.path1.1
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65795 similar to UniRef100_O48902 Cluster: Malate deh... 977 0.0
gnl|LJGI|DC597453 similar to UniRef100_O48902 Cluster: Malate de... 494 e-139
gnl|LJGI|GO026504 homologue to UniRef100_P21528 Cluster: Malate ... 70 2e-11
>gnl|LJGI|TC65795 similar to UniRef100_O48902 Cluster: Malate dehydrogenase [NADP],
chloroplast precursor; n=1; Medicago sativa|Rep: Malate
dehydrogenase [NADP], chloroplast precursor - Medicago
sativa (Alfalfa), partial (34%)
Length = 728
Score = 977 bits (493), Expect = 0.0
Identities = 493/493 (100%)
Strand = Plus / Plus
Query: 1 atggctgtggcacagttcaaccccacttgctcaaaaacccatctttcctcttcccaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atggctgtggcacagttcaaccccacttgctcaaaaacccatctttcctcttcccaatcc 295
Query: 61 tcatttctatctaggagcatccatggtcaccgccactgtgcttttgcactgcctcagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tcatttctatctaggagcatccatggtcaccgccactgtgcttttgcactgcctcagaga 355
Query: 121 acccaacatgctagtatttcttgctctgttgctccaaatgaagtgcaggtgcctgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acccaacatgctagtatttcttgctctgttgctccaaatgaagtgcaggtgcctgctgtg 415
Query: 181 caaaccctggattctaagggcaagcctgaatgctatggagtcttctgtcttacctatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caaaccctggattctaagggcaagcctgaatgctatggagtcttctgtcttacctatgat 475
Query: 241 ttgaaggctgaagaagagacagtatcctggaagaaattaattaacattgcagtctcaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgaaggctgaagaagagacagtatcctggaagaaattaattaacattgcagtctcaggt 535
Query: 301 gctgctggaatgatttccaaccacctacttttcaagcttgcatctggtgaagtttttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gctgctggaatgatttccaaccacctacttttcaagcttgcatctggtgaagtttttggt 595
Query: 361 ccaaatcaacctattgctctgaaactattaggatcagaaaggtcattccaagctcttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ccaaatcaacctattgctctgaaactattaggatcagaaaggtcattccaagctcttgaa 655
Query: 421 ggtgttgcaatggaattggaggactccttgtttcctttgttacgggaggtgagcattggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggtgttgcaatggaattggaggactccttgtttcctttgttacgggaggtgagcattggt 715
Query: 481 attgattcttatg 493
|||||||||||||
Sbjct: 716 attgattcttatg 728
>gnl|LJGI|DC597453 similar to UniRef100_O48902 Cluster: Malate dehydrogenase [NADP],
chloroplast precursor; n=1; Medicago sativa|Rep: Malate
dehydrogenase [NADP], chloroplast precursor - Medicago
sativa (Alfalfa), partial (18%)
Length = 549
Score = 494 bits (249), Expect = e-139
Identities = 321/341 (94%), Gaps = 3/341 (0%)
Strand = Plus / Plus
Query: 1 atggctgtggcacagttcaaccccacttgctcaaaaacccatctttcctcttcccaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggctgtggcacagttcaaccccacttgctcaaaaacccatctttcctcttcccaatcc 271
Query: 61 tcatttctatctaggagcatccatggtcaccgccactgtgcttttgcactgcctcagaga 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 272 tcatttctatctaggagcatccatggtcaccgccactgtgcttttgcaaaaaaa-agaga 330
Query: 121 acccaacatgctagtatttcttgctctgttgctccaaatgaagtgcaggtgcctgctgtg 180
||| ||||||||||||| | | ||||||||| ||||||||||||||||||||||
Sbjct: 331 acc-aacatgctagtataaaataaaatattgctccaa-tgaagtgcaggtgcctgctgtg 388
Query: 181 caaaccctggattctaagggcaagcctgaatgctatggagtcttctgtcttacctatgat 240
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caaaccctggattataatggcaagcctgaatgctatggagtcttctgtcttacctatgat 448
Query: 241 ttgaaggctgaagaagagacagtatcctggaagaaattaattaacattgcagtctcaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttgaaggctgaagaagagacagtatcctggaagaaattaattaacattgcagtctcaggt 508
Query: 301 gctgctggaatgatttccaaccacctacttttcaagcttgc 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gctgctggaatgatttccaaccacctacttttcaagcttgc 549
>gnl|LJGI|GO026504 homologue to UniRef100_P21528 Cluster: Malate dehydrogenase [NADP],
chloroplast precursor; n=1; Pisum sativum|Rep: Malate
dehydrogenase [NADP], chloroplast precursor - Pisum
sativum (Garden pea), partial (36%)
Length = 719
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 683 tatgcttgaagaatgctccaaatattcctgcaaaa 717
|||||||||||||||||||||||||||||||||||
Sbjct: 2 tatgcttgaagaatgctccaaatattcctgcaaaa 36