Miyakogusa Predicted Gene
- Lj5g3v1697820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1697820.1 Non Chatacterized Hit- tr|I1NHT7|I1NHT7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.26,0,ENDOPEPTIDASE
CLP ATP-BINDING CHAIN,NULL; ATP-DEPENDENT CLP PROTEASE,NULL; no
description,Double Clp,CUFF.55776.1
(2523 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68904 similar to UniRef100_A7SUQ1 Cluster: Predicted ... 64 5e-09
gnl|LJGI|TC60159 similar to UniRef100_Q8RYC8 Cluster: Auxin resp... 64 5e-09
gnl|LJGI|TC75546 60 7e-08
gnl|LJGI|TC77089 58 3e-07
>gnl|LJGI|TC68904 similar to UniRef100_A7SUQ1 Cluster: Predicted protein; n=2;
Nematostella vectensis|Rep: Predicted protein -
Nematostella vectensis (Starlet sea anemone), partial
(5%)
Length = 826
Score = 63.9 bits (32), Expect = 5e-09
Identities = 85/102 (83%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 2398 gatgaatgtcccagcctctgtttggatttgaatatagccattgaagatggtagtagaggt 2457
|||||| |||| ||||||| ||| || |||||||| |||| |||||| || |||||||
Sbjct: 441 gatgaaagtccaagcctctctttcaatctgaatatatgcatttaagatgataatagaggt 500
Query: 2458 gctgctttaggtggagataatggtatcctagagttagttgat 2499
||||||||||||||| | ||||||||||||||||||||
Sbjct: 501 attgctttaggtggagaca---gtatcctagagttagttgat 539
>gnl|LJGI|TC60159 similar to UniRef100_Q8RYC8 Cluster: Auxin response factor 19; n=2;
Arabidopsis thaliana|Rep: Auxin response factor 19 -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 1684
Score = 63.9 bits (32), Expect = 5e-09
Identities = 85/102 (83%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 2398 gatgaatgtcccagcctctgtttggatttgaatatagccattgaagatggtagtagaggt 2457
|||||| |||| ||||||| ||| || |||||||| |||| |||||| || |||||||
Sbjct: 1303 gatgaaagtccaagcctctctttcaatctgaatatatgcatttaagatgataatagaggt 1362
Query: 2458 gctgctttaggtggagataatggtatcctagagttagttgat 2499
||||||||||||||| | ||||||||||||||||||||
Sbjct: 1363 attgctttaggtggagaca---gtatcctagagttagttgat 1401
>gnl|LJGI|TC75546
Length = 629
Score = 60.0 bits (30), Expect = 7e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 2397 tgatgaatgtcccagcctctgtttggatttgaatatagccattgaagatggtagtagagg 2456
||||||| |||||||||||| ||| || |||||||| |||| |||||| || ||||||
Sbjct: 219 tgatgaaagtcccagcctctctttccatctgaatatatgcatttaagatgataatagagg 278
Query: 2457 tgctgctttaggtggaga 2474
| |||||||||||||||
Sbjct: 279 tattgctttaggtggaga 296
>gnl|LJGI|TC77089
Length = 560
Score = 58.0 bits (29), Expect = 3e-07
Identities = 82/99 (82%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 2397 tgatgaatgtcccagcctctgtttggatttgaatatagccattgaagatggtagtagagg 2456
||||||| |||| ||||||| ||| || |||||||| |||| |||||| || ||||||
Sbjct: 253 tgatgaaagtccaagcctctctttcaatctgaatatatgcatttaagatgataatagagg 312
Query: 2457 tgctgctttaggtggagataatggtatcctagagttagt 2495
| ||||||||||||||| | ||||||||||||||||
Sbjct: 313 tattgctttaggtggagaca---gtatcctagagttagt 348