Miyakogusa Predicted Gene

Lj5g3v1697600.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1697600.2 Non Chatacterized Hit- tr|A9NUV4|A9NUV4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,32.74,6e-19,coiled-coil,NULL,CUFF.55757.2
         (738 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP054920 similar to UniRef100_Q11WV3 Cluster: Possible ...   391   e-108

>gnl|LJGI|BP054920 similar to UniRef100_Q11WV3 Cluster: Possible peptidyl-arginyl
           deiminase; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
           Possible, partial (4%)
          Length = 379

 Score =  391 bits (197), Expect = e-108
 Identities = 197/197 (100%)
 Strand = Plus / Minus

                                                                       
Query: 542 tgaaggtgacagatgctgatagctatatacctgcttcaacgttcactgcaggagaaggaa 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgaaggtgacagatgctgatagctatatacctgcttcaacgttcactgcaggagaaggaa 320

                                                                       
Query: 602 ctagcaggtttcatgatgctaccgagtataagcgtggtggagagtgttccatatcaagtg 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctagcaggtttcatgatgctaccgagtataagcgtggtggagagtgttccatatcaagtg 260

                                                                       
Query: 662 gtagaagtaaaggaagtgaagcaagggttccattacctcctggtcgtgtttacaataaca 721
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtagaagtaaaggaagtgaagcaagggttccattacctcctggtcgtgtttacaataaca 200

                            
Query: 722 aaactgtgtatcactag 738
           |||||||||||||||||
Sbjct: 199 aaactgtgtatcactag 183