Miyakogusa Predicted Gene
- Lj5g3v1697440.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1697440.2 tr|G7I306|G7I306_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_070s0024 PE=4
S,88.13,0,GPROTEINBRPT,G-protein beta WD-40 repeat; WD40
repeat-like,WD40-repeat-containing domain; WD40 repea,CUFF.55755.2
(1497 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75212 weakly similar to UniRef100_A7NSU7 Cluster: Chr... 591 e-168
gnl|LJGI|BP066328 weakly similar to UniRef100_A7NSU7 Cluster: Ch... 305 4e-82
gnl|LJGI|BP068143 UniRef100_A8MKP4 Cluster: GCN5-related N-acety... 283 2e-75
gnl|LJGI|DC594811 190 2e-47
>gnl|LJGI|TC75212 weakly similar to UniRef100_A7NSU7 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 606
Score = 591 bits (298), Expect = e-168
Identities = 315/321 (98%)
Strand = Plus / Plus
Query: 1177 gatgattacctctttgcttgtggttcttcagttgatgcaactgccggaaagatattttca 1236
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgattacctctttgcttgtgtttcttcagttgatgcaactgccggaaagatattttca 60
Query: 1237 ctttcccaaaaaatggtggtgggatcactctcaactgggcttgacattcatcgcatagcc 1296
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttcccaaaaaatgttggtgggatcactctcaactgggcttgacattcatcgcatagcc 120
Query: 1297 atcaacagtgacttcatatttgctggtacaaaatttggcaccattgaggtttggctgaaa 1356
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 121 atcaacagtgacttcatatttgctggtacnaaatttggcaccattgaggtttgggtgaaa 180
Query: 1357 gataagtttacccgggttgcttccatcaaaatggctggtggtcacacaaaaattacatca 1416
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 gataagtttacccgggttgcttccatcaaaatggctggtggtcacaccaaaattacatca 240
Query: 1417 ttagtatcagatgtagatggtatgatgctttttgttggttcctctgatggcaaaatccag 1476
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 ttagtatcagatgtagatggtatgatgctttttgttggttcctttgatggcaaaatccag 300
Query: 1477 gtttgggctttggattaagca 1497
|||||||||||||||||||||
Sbjct: 301 gtttgggctttggattaagca 321
>gnl|LJGI|BP066328 weakly similar to UniRef100_A7NSU7 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 514
Score = 305 bits (154), Expect = 4e-82
Identities = 210/222 (94%), Gaps = 8/222 (3%)
Strand = Plus / Minus
Query: 1168 caaatacatgatgattacctctttgcttgtggttcttcagttgatgcaactgccggaaag 1227
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 514 caaatacatgatgattacctctttgcttgtgtttcttcagttgatgcaactgccggaaag 455
Query: 1228 atattttcactttcccaaaaaatggtggtgggatcactctcaactgggcttgacattcat 1287
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 454 atattttcactttcccnaaaaatggtgntgggatcactctcaactgggcttgacattcat 395
Query: 1288 cgcatagccatcaacagtgacttcatatttgctggt-ac-aaaatttggcac-cattga- 1343
|||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||
Sbjct: 394 cgcatagccatcaacagtgacttcatatttgctggtcacaaaaatttggcacncattgag 335
Query: 1344 ggtttggctgaaag--ataagttt--acccgggttgcttcca 1381
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 334 ggtttggctgaaagaaataagttttaccccgggttgcttcca 293
>gnl|LJGI|BP068143 UniRef100_A8MKP4 Cluster: GCN5-related N-acetyltransferase; n=1;
Alkaliphilus oremlandii OhILAs|Rep: GCN5-related
N-acetyltransferase - Alkaliphilus oremlandii (strain
OhILAs) (Clostridium oremlandii(strain OhILAs)), partial
(7%)
Length = 433
Score = 283 bits (143), Expect = 2e-75
Identities = 232/255 (90%), Gaps = 10/255 (3%)
Strand = Plus / Minus
Query: 1253 tggtgggatcactctcaactgggcttgacattcatcgcatagccatcaaca-gtgacttc 1311
|||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||
Sbjct: 433 tggtgggatcactctccactgggcttgacattcatcgcatagccatccacccgtgacttc 374
Query: 1312 atatttgctggtacaaaatttggcaccattgagg---tttggctgaaagataagttta-c 1367
||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| |
Sbjct: 373 atatttgctggtacaaactttggcacccttgacgcgctttggctgaaagataagtttaac 314
Query: 1368 ccgggttg--ct-tccatcaaaa--tggctggtggtcacacaaaaattacatcattagta 1422
||||| | || |||||| || ||||||||||||||||| | | |||||||||||||
Sbjct: 313 ccgggctcgcctgtccatccaacactggctggtggtcacacacacactacatcattagta 254
Query: 1423 tcagatgtagatggtatgatgctttttgttggttcctctgatggcaaaatccaggtttgg 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcagatgtagatggtatgatgctttttgttggttcctctgatggcaaaatccaggtttgg 194
Query: 1483 gctttggattaagca 1497
|||||||||||||||
Sbjct: 193 gctttggattaagca 179
>gnl|LJGI|DC594811
Length = 112
Score = 190 bits (96), Expect = 2e-47
Identities = 108/112 (96%)
Strand = Plus / Plus
Query: 610 ttgtggagttgtaaagaagttgttgagttagatttgagctcaaatggtgaggtgctttct 669
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 1 ttgtggagttgtaaagaagttgttgacctacatttgagctcaaatggtgaggtgctttct 60
Query: 670 atggtttatctgaatggtcaagtcttgagtggacacactgatggaactatca 721
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 atggtttatctgaatggtcaagtcttgagtggacccactgatggaactatca 112