Miyakogusa Predicted Gene
- Lj5g3v1697440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1697440.1 tr|G7I306|G7I306_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_070s0024 PE=4 S,81,0,Modified
RING finger domain,U box domain; U-box,U box domain; RING/U-box,NULL;
ARM repeat,Armadillo-,CUFF.55755.1
(3591 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593518 similar to UniRef100_A7NSU7 Cluster: Chromosom... 1072 0.0
>gnl|LJGI|DC593518 similar to UniRef100_A7NSU7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 561
Score = 1072 bits (541), Expect = 0.0
Identities = 556/561 (99%)
Strand = Plus / Plus
Query: 2289 ggctgctcttcttatttaccaactacggccggtttttgcccagctttcagctcatgaact 2348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgctcttcttatttaccaactacggccggtttttgcccagctttcagctcatgaact 60
Query: 2349 tataccctctcttgttgatgtgatccagaacaaaaatgaggagttagatgattttcagtt 2408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataccctctcttgttgatgtgatccagaacaaaaatgaggagttagatgattttcagtt 120
Query: 2409 agttatagaccccaaagacgctgccatagctattcttgaacaaactttaatgggagggga 2468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttatagaccccaaagacgctgccatagctattcttgaacaaactttaatgggagggga 180
Query: 2469 tgaatatagcaggtctcttaatgcttcgagtgttatttcagcaaatggaattccaacctt 2528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaatatagcaggtctcttaatgcttcgagtgttatttcagcaaatggaattccaacctt 240
Query: 2529 ggtgaagtatttggagaggatggaaggaaggaggtctgtggtttccgtgctcttgtgttg 2588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtgaagtatttggagaggatggaaggaaggaggtctgtggtttccgtgctcttgtgttg 300
Query: 2589 tatgcaagctgaaaaaagttgcaagaacttgatagcaaacagaattgaattgtctcctgt 2648
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgcaagctgagaaaagttgcaagaacttgatagcaaacagaattgaattgtctcctgt 360
Query: 2649 tcttgaattattccactcaggaaatgatagtgtgagaggaacatgtgtggagtttctctc 2708
||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 tcttgaattattccactcaagaaatgatagtgtgagaggaacatgtgtggagttagtctc 420
Query: 2709 agaactggttcaattaaatagaaggacaagctgcaaccagatactgcacacaattaagga 2768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaactggttcaattaaatagaaggacaagctgcaaccagatactgcacacaattaagga 480
Query: 2769 tgaaggagcattcagtacaatgcatacatttcttgtatatcttcagatggctcctatgga 2828
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 tgaaggagcattcagtacaatgcatacatttcttgtatatcttcaaatggctcctatgga 540
Query: 2829 gcatcaacttgctgttgctag 2849
|||||||||||||||||||||
Sbjct: 541 gcatcaacttgctgttgctag 561