Miyakogusa Predicted Gene
- Lj5g3v1697410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1697410.1 Non Chatacterized Hit- tr|D7T3A6|D7T3A6_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,79.89,0,no
description,TRAF-type; coiled-coil,NULL; MATH,MATH; UCH_2_3,Peptidase
C19, ubiquitin carboxyl-ter,CUFF.55748.1
(3384 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV408677 similar to UniRef100_A7Q028 Cluster: Chromosom... 387 e-106
gnl|LJGI|TC64948 homologue to UniRef100_A7PGA4 Cluster: Chromoso... 365 1e-99
gnl|LJGI|TC76403 homologue to UniRef100_Q9FPT1 Cluster: Ubiquiti... 339 7e-92
gnl|LJGI|TC67931 homologue to UniRef100_A7QNS3 Cluster: Chromoso... 309 6e-83
gnl|LJGI|BU494249 similar to UniRef100_A7M8L1 Cluster: Major amp... 276 9e-73
gnl|LJGI|TC63186 similar to UniRef100_A7Q028 Cluster: Chromosome... 119 1e-25
gnl|LJGI|TC63462 similar to UniRef100_A7Q028 Cluster: Chromosome... 113 7e-24
gnl|LJGI|AV420019 similar to UniRef100_A7PGA4 Cluster: Chromosom... 107 5e-22
gnl|LJGI|TC73499 94 7e-18
gnl|LJGI|TC61997 similar to UniRef100_A7PGA4 Cluster: Chromosome... 82 3e-14
gnl|LJGI|TC74441 similar to UniRef100_A7Q028 Cluster: Chromosome... 60 1e-07
>gnl|LJGI|AV408677 similar to UniRef100_A7Q028 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 195
Score = 387 bits (195), Expect = e-106
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 2510 catatgattatgttgttacaagagttgctcaacatcttggtttgaatgatccttctaaaa 2569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catatgattatgttgttacaagagttgctcaacatcttggtttgaatgatccttctaaaa 60
Query: 2570 tcagactcacatctcataactgttactcccagctacctaaaccccagcctatcaagtacc 2629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagactcacatctcataactgttactcccagctacctaaaccccagcctatcaagtacc 120
Query: 2630 gaggagttgaacatttatctgacatgctggttcactacaatcagacttctgatatactat 2689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggagttgaacatttatctgacatgctggttcactacaatcagacttctgatatactat 180
Query: 2690 actatgaagtactgg 2704
|||||||||||||||
Sbjct: 181 actatgaagtactgg 195
>gnl|LJGI|TC64948 homologue to UniRef100_A7PGA4 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1322
Score = 365 bits (184), Expect = 1e-99
Identities = 571/700 (81%)
Strand = Plus / Plus
Query: 898 tgtgaaaagctagaagacaaaatgaagggaactgttgtggaaggcaccatacagaagttg 957
|||||||| || |||||||||||||||||||||||||| || || || |||||||| ||
Sbjct: 3 tgtgaaaaacttgaagacaaaatgaagggaactgttgttgagggaactatacagaaatta 62
Query: 958 tttgaaggccaccatatgaactatattgaatgcatcaatgtggactataaatcaaccaga 1017
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 63 tttgaagggcaccatatgaactatattgagtgcatcaatgtggactataaatcaactaga 122
Query: 1018 aaagaatcattttatgatcttcagcttgacgtcaaaggatgtcgggatgtgtatgattct 1077
|| || || |||||||| ||||| ||||| || ||||| |||| ||||| |||| |||
Sbjct: 123 aaggagtccttttatgaccttcaacttgatgtgaaaggctgtcatgatgtttatgcttcc 182
Query: 1078 tttgacaagtatgttgaagtggaaagacttgagggtgataacaagtatcatgctgagcag 1137
|||||||||||||||||||| ||| |||||||| || ||||||||||||||||| ||
Sbjct: 183 tttgacaagtatgttgaagttgaacctcttgagggggacaacaagtatcatgctgaacaa 242
Query: 1138 tacggtttgcaggaggctaagaagggtgtcttgttcattgatttccctcctgttcttcag 1197
|| ||||||||||| ||||||||||||||| | || |||||||| ||||||||||| |||
Sbjct: 243 tatggtttgcaggatgctaagaagggtgtcctatttattgattttcctcctgttctgcag 302
Query: 1198 cttcagttaaaacgatttgaatatgatttcatgcgagacactatggtaaagatcaatgat 1257
|||||| | ||| ||||||| |||||||| ||||| ||||||||||||||||| || |||
Sbjct: 303 cttcagctgaaaagatttgagtatgattttatgcgggacactatggtaaagattaacgat 362
Query: 1258 cgctatgagttcccgttagagctagatcttgataggggcaatggcaagtatctatctcct 1317
|| || ||||| || || || || || |||||| | | |||| || ||| |||| |||
Sbjct: 363 cgttacgagtttcccttggaacttgaccttgatcgtgatgatggaaaatatttatcacct 422
Query: 1318 gaagcagataaaagcattcgcaacctttatgtacttcacagtgttttagttcacagcggt 1377
|| || |||| | | ||||| ||||| |||||| |||||||| |||||||| |||
Sbjct: 423 gatgctgataggaatgtccgcaatctttacacacttcatagtgttttggttcacagtggt 482
Query: 1378 ggggttcatggtggacactattttgcttatatcaggccaactctatcaaatgaatggttt 1437
|| || |||||||| || |||| ||||| |||| |||| ||||| || || | ||||
Sbjct: 483 ggtgtgcatggtgggcattattatgcttttatccggccgactctctctgatcagtggtac 542
Query: 1438 aaatttgacgacgcacgagtgacgaaagaagatgcagatagggccttagaagagcagtat 1497
|||||||| || | | ||||| ||||||||| | | |||| |||| ||||| |||
Sbjct: 543 aaatttgatgatgagagggtgacaaaagaagatactaaacgggcactagaggagcaatat 602
Query: 1498 ggtggtgaagaagagttacctcatgccaatcccgggttcaacaactctcccttcaaattt 1557
||||| || ||||||||||| || | ||||| || ||||| ||| | || || |||||
Sbjct: 603 ggtggggaggaagagttaccccagacaaatcctggattcaataacacaccttttaaattc 662
Query: 1558 acaaagtactcaaatgcatatatgcttgtttatatacgtg 1597
|| || || ||||||||||||||||| || ||||||||||
Sbjct: 663 accaaatattcaaatgcatatatgctggtatatatacgtg 702
Score = 69.9 bits (35), Expect = 1e-10
Identities = 134/167 (80%)
Strand = Plus / Plus
Query: 1768 cagattggaaaggatatattctttgatctagtggatcataacaaagtgcgaagttttcgt 1827
||||||||||||||||||| |||||||| || || ||| |||||||| | ||||| |||
Sbjct: 873 cagattggaaaggatatatattttgatctcgtagaccatgacaaagtgaggagtttccgt 932
Query: 1828 atccaaaaacaaatgccattcttgtgttttaaggaagaagttgctagagagttcggtata 1887
||||||| || ||| |||| ||| |||||||| ||||||| |||||| || |||
Sbjct: 933 gtccaaaagcagatgtcatttaaccttttcaaggaagaggttgctaaagagtttggcata 992
Query: 1888 cctgtccaatatcaacgtttttgggtgtgggcaaagcgccaaaacca 1934
|| || |||| || || |||||| | ||||||||||| ||||||||
Sbjct: 993 ccagttcaattccagcgcttttggctatgggcaaagcgtcaaaacca 1039
>gnl|LJGI|TC76403 homologue to UniRef100_Q9FPT1 Cluster: Ubiquitin carboxyl-terminal
hydrolase 12; n=1; Arabidopsis thaliana|Rep: Ubiquitin
carboxyl-terminal hydrolase 12 - Arabidopsis thaliana
(Mouse-ear cress), partial (19%)
Length = 654
Score = 339 bits (171), Expect = 7e-92
Identities = 396/471 (84%)
Strand = Plus / Plus
Query: 951 gaagttgtttgaaggccaccatatgaactatattgaatgcatcaatgtggactataaatc 1010
|||||| |||||||| |||||||||||||| || || |||||||||||||||||||||||
Sbjct: 1 gaagttatttgaaggacaccatatgaactacatagagtgcatcaatgtggactataaatc 60
Query: 1011 aaccagaaaagaatcattttatgatcttcagcttgacgtcaaaggatgtcgggatgtgta 1070
||| ||||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||
Sbjct: 61 aactcgaaaagagtcattttatgaccttcagcttgatgttaaaggttgtcgtgatgttta 120
Query: 1071 tgattcttttgacaagtatgttgaagtggaaagacttgagggtgataacaagtatcatgc 1130
|| ||| ||||| |||||||| ||||| || | |||||||| |||||||| ||||||||
Sbjct: 121 tgcttcctttgataagtatgtggaagttgagcgtcttgagggagataacaaatatcatgc 180
Query: 1131 tgagcagtacggtttgcaggaggctaagaagggtgtcttgttcattgatttccctcctgt 1190
||| ||||| ||||||||||| ||||||||||||||||| || |||||||| ||||||||
Sbjct: 181 tgaacagtatggtttgcaggatgctaagaagggtgtcttatttattgattttcctcctgt 240
Query: 1191 tcttcagcttcagttaaaacgatttgaatatgatttcatgcgagacactatggtaaagat 1250
|||||||||||| | ||| |||||||||||||||| ||| |||| |||||||| |||||
Sbjct: 241 ccttcagcttcagctgaaaagatttgaatatgattttatgagagatactatggttaagat 300
Query: 1251 caatgatcgctatgagttcccgttagagctagatcttgataggggcaatggcaagtatct 1310
|| || || |||||||| || | ||| || |||||||| | | |||| || |||||
Sbjct: 301 taacgaccgttatgagtttccatcagaacttgatcttgaccgtgaggatggaaaatatct 360
Query: 1311 atctcctgaagcagataaaagcattcgcaacctttatgtacttcacagtgttttagttca 1370
||| ||||| ||||||| || | ||||| ||||| ||||||||||||||| |||||
Sbjct: 361 atcacctgacgcagataggagtgtccgcaatctttacacacttcacagtgttttggttca 420
Query: 1371 cagcggtggggttcatggtggacactattttgcttatatcaggccaactct 1421
||| || || || ||||||||||| || | ||||| |||||||||||||||
Sbjct: 421 cagtggaggagtgcatggtggacattactatgcttttatcaggccaactct 471
>gnl|LJGI|TC67931 homologue to UniRef100_A7QNS3 Cluster: Chromosome undetermined
scaffold_134, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_134, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 1001
Score = 309 bits (156), Expect = 6e-83
Identities = 537/664 (80%)
Strand = Plus / Plus
Query: 264 tgttgggggctacagatggcggatacttatatttccaaaggggaacaatgttgatcagtt 323
|||||| || |||| |||||| ||||||| || ||||| || |||||||| || | ||
Sbjct: 338 tgttggtggttacaaatggcgtgtacttattttcccaaaaggaaacaatgtggactattt 397
Query: 324 gtcattgtatctagatgctactgattcagcaactttgccttatggatggagtagatatgc 383
||| ||||| | |||| | | |||||||||| |||||| ||||| ||||||||||||||
Sbjct: 398 gtccatgtatttggatgttgcagattcagcaagtttgccctatggttggagtagatatgc 457
Query: 384 acagtttagcttgactgttgtcaatcaaattcgccataatttctcaatcagaaaagaaac 443
|||||| |||||| | ||||| |||||||| | |||| | || | |||||||| ||
Sbjct: 458 acagttcagcttggcagttgttaatcaaatccagaataagtatacagtgagaaaagacac 517
Query: 444 acatcaccaattcaatgctcgtgagggtgattggggtttcacaagtttcatgcctcttgc 503
||| |||||||| |||||||| || |||||||||||||||| |||||||||||||
Sbjct: 518 acaacaccaatttaatgctcgagaaagtgattggggtttcacgtccttcatgcctcttgg 577
Query: 504 tgaattgtatgatcccggtagaggttatattgtgaatgatacatgcatagttgaggctga 563
||||||||| || || ||||||| ||| | ||||||||||| | || |||| |||||
Sbjct: 578 tgaattgtacgaccctagtagagggtatctggtgaatgatactctcttaattgaagctga 637
Query: 564 tgttgctgtacgcaaggttattgattactggtcacatgactctaaaaaggaaactggtta 623
||| ||| || | | || ||||||||||| |||| || || ||||| ||||| ||
Sbjct: 638 ggttcttgttcgtaggattgttgattactggaattatgattcaaagaaggagactggcta 697
Query: 624 tgtcggactaaaaaaccaaggggcgacatgttacatgaattctctccttcagacattgta 683
||| || || || |||||||| || || ||||| ||||||||||| || ||||| | ||
Sbjct: 698 tgttgggcttaagaaccaaggagctacctgttatatgaattctctactccagactctata 757
Query: 684 tcacattccttattttagaaaggctgtgtaccatatgcctacaactgagaatgatttgcc 743
||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 758 tcacattccatattttagaaaggctgtataccatatgccaacaactgagaatgatatgcc 817
Query: 744 atcgggaagcattcctttggcattgcaaagtttattctacaagctgcagtattatgacag 803
|| |||||||| |||||||| | ||||||||||| |||||||| || ||| |||||
Sbjct: 818 ctccggaagcatccctttggctctccaaagtttattttacaagctccaatatagtgacac 877
Query: 804 tagcgtagcaacgaaagagttaacaaaatcttttggatgggacacacaggattcattcct 863
||| || ||||| || ||| | ||||| |||||||||||||| ||| | ||||| ||| |
Sbjct: 878 tagtgttgcaacaaaggagctgacaaagtcttttggatgggatacatatgattctttcat 937
Query: 864 gcagcatgacgtccaagagcttaatagagttctttgtgaaaagctagaagacaaaatgaa 923
||||||||| || ||||| || ||| |||| || ||||||||||| ||||||||||||||
Sbjct: 938 gcagcatgatgttcaagaactaaatcgagtcctctgtgaaaagcttgaagacaaaatgaa 997
Query: 924 ggga 927
||||
Sbjct: 998 ggga 1001
>gnl|LJGI|BU494249 similar to UniRef100_A7M8L1 Cluster: Major ampullate spidroin 1;
n=1; Euprosthenops australis|Rep: Major ampullate
spidroin 1 - Euprosthenops australis, partial (8%)
Length = 348
Score = 276 bits (139), Expect = 9e-73
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 98 ttcctccctctgatgttcctgaaggtcctcagcctatggatgcccaaccagaaaccacaa 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttcctccctctgatgttcctgaaggtcctcagcctatggatgcccaaccagaaaccacaa 269
Query: 158 atttgtttggtgctccgatagtggacgagtcaccatctgggcggttcacatggaccatca 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atttgtttggtgctccgatagtggacgagtcaccatctgggcggttcacatggaccatca 329
Query: 218 ggaatttttcaaggtctac 236
|||||||||||||||||||
Sbjct: 330 ggaatttttcaaggtctac 348
>gnl|LJGI|TC63186 similar to UniRef100_A7Q028 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 782
Score = 119 bits (60), Expect = 1e-25
Identities = 249/312 (79%)
Strand = Plus / Plus
Query: 357 tttgccttatggatggagtagatatgcacagtttagcttgactgttgtcaatcaaattcg 416
|||||| ||||| ||||||||||||||||||||||||||| | || || |||||||| |
Sbjct: 454 tttgccctatggttggagtagatatgcacagtttagcttggcagtagttaatcaaataca 513
Query: 417 ccataatttctcaatcagaaaagaaacacatcaccaattcaatgctcgtgagggtgattg 476
|||| | | | | |||||||| ||||| || ||||||||||| || || |||||||
Sbjct: 514 gaataaatacaccgtgagaaaagacacacagcatcaattcaatgcacgagaaagtgattg 573
Query: 477 gggtttcacaagtttcatgcctcttgctgaattgtatgatcccggtagaggttatattgt 536
||||||||| |||||||| |||| |||||||||||||||| ||||||| ||| || |
Sbjct: 574 gggtttcacgtccttcatgccgcttggtgaattgtatgatcccagtagagggtatcttct 633
Query: 537 gaatgatacatgcatagttgaggctgatgttgctgtacgcaaggttattgattactggtc 596
||||||||| ||||||| || || ||| ||| || | | || ||||||||||| |
Sbjct: 634 gaatgatactcttgtagttgaagccgaggttcttgttcgtaggattgttgattactggac 693
Query: 597 acatgactctaaaaaggaaactggttatgtcggactaaaaaaccaaggggcgacatgtta 656
|||| || |||||||| ||||| ||||| || || || ||||| || || ||||||||
Sbjct: 694 ttatgattcaaaaaaggagactggctatgttgggctgaagaaccagggagctacatgtta 753
Query: 657 catgaattctct 668
|||||||||||
Sbjct: 754 tatgaattctct 765
>gnl|LJGI|TC63462 similar to UniRef100_A7Q028 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 715
Score = 113 bits (57), Expect = 7e-24
Identities = 156/189 (82%)
Strand = Plus / Plus
Query: 357 tttgccttatggatggagtagatatgcacagtttagcttgactgttgtcaatcaaattcg 416
|||||| ||||| ||||||||||||||||||||||||||| | || || |||||||| |
Sbjct: 464 tttgccctatggttggagtagatatgcacagtttagcttggcagtagttaatcaaataca 523
Query: 417 ccataatttctcaatcagaaaagaaacacatcaccaattcaatgctcgtgagggtgattg 476
|||| | | | | |||||||| ||||| || ||||||||||| || || |||||||
Sbjct: 524 gaataaatacaccgtgagaaaagacacacagcatcaattcaatgcacgagaaagtgattg 583
Query: 477 gggtttcacaagtttcatgcctcttgctgaattgtatgatcccggtagaggttatattgt 536
||||||||| |||||||| |||| |||||||||||||||| ||||||| ||| || |
Sbjct: 584 gggtttcacgtccttcatgccgcttggtgaattgtatgatcccagtagagggtatcttct 643
Query: 537 gaatgatac 545
|||||||||
Sbjct: 644 gaatgatac 652
>gnl|LJGI|AV420019 similar to UniRef100_A7PGA4 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 216
Score = 107 bits (54), Expect = 5e-22
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 2587 aactgttactcccagctacctaaaccccagcctatcaagtaccgaggagttgaacattta 2646
||||| ||||| || | |||||||||||||||||| |||||| |||| || || ||||||
Sbjct: 111 aactgctactctcaacaacctaaaccccagcctataaagtacagaggggtggatcattta 170
Query: 2647 tctgacatgctggttcactacaatcagacttctgatatactatact 2692
||||| ||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 171 tctgatatgctggttcattacaatcagacttcggatatattatact 216
>gnl|LJGI|TC73499
Length = 515
Score = 93.7 bits (47), Expect = 7e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 3326 cctacatagtcaaccagaaccggcatgcatttgataagccagtaaaaatctacaactag 3384
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 cctacatagtcaaccagaaccggcatgcatttgataagccagtcccaatctacaactag 59
>gnl|LJGI|TC61997 similar to UniRef100_A7PGA4 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 968
Score = 81.8 bits (41), Expect = 3e-14
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 3250 tttcagagaagagatatatatggtgcttgggagcaatatcttggactggaacacactgac 3309
||||||||||||||| | ||||||||||||||||| |||||||| |||| || ||||||
Sbjct: 351 tttcagagaagagatgtttatggtgcttgggagcagtatcttggtttggagcatactgac 410
Query: 3310 aatgctccaaaaaggtc 3326
|||||||| || |||||
Sbjct: 411 aatgctcctaagaggtc 427
>gnl|LJGI|TC74441 similar to UniRef100_A7Q028 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 826
Score = 60.0 bits (30), Expect = 1e-07
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 3250 tttcagagaagagatatatatggtgcttgggagcaatatcttggactggaacacactgac 3309
|||||||| |||||| | ||||||||||||||||||||| | || | || || |||||
Sbjct: 195 tttcagaggagagatgtttatggtgcttgggagcaatatttcggcttagagcatactgat 254
Query: 3310 aatgctccaaaaaggtcctacatagtcaaccagaaccggcatgcatttgataagccagta 3369
|||||||||||||| || || ||||||||||| || || | ||||| |||||||||
Sbjct: 255 aatgctccaaaaagatcatatgctgtcaaccagaatcgccacacctttgagaagccagta 314
Query: 3370 aa 3371
||
Sbjct: 315 aa 316