Miyakogusa Predicted Gene
- Lj5g3v1697110.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1697110.2 Non Chatacterized Hit- tr|I1LCH7|I1LCH7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.27,0,TRANSCRIPTION
INITIATION FACTOR IIH-RELATED,NULL; BSD,BSD; seg,NULL; BSD
domain-like,NULL; PH domain,CUFF.55744.2
(1752 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74234 similar to UniRef100_A4Q530 Cluster: BSD; n=1; ... 904 0.0
gnl|LJGI|FS362311 similar to UniRef100_Q1RSH7 Cluster: General t... 452 e-126
>gnl|LJGI|TC74234 similar to UniRef100_A4Q530 Cluster: BSD; n=1; Medicago
truncatula|Rep: BSD - Medicago truncatula (Barrel
medic), partial (92%)
Length = 798
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtctgggcaagtggttaagcgtgccaaatacaaaaccaccgtgaaaggtcctggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atgtcgtctgggcaagtggttaagcgtgccaaatacaaaaccaccgtgaaaggtcctggc 402
Query: 61 actcctggtattctcaaattgactcaagataagtttgttttcaagcctaatgatcctacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 actcctggtattctcaaattgactcaagataagtttgttttcaagcctaatgatcctacc 462
Query: 121 tcaaacaacaagctcgacgtcgagttcagatttataaaaggtcatagagttacgaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tcaaacaacaagctcgacgtcgagttcagatttataaaaggtcatagagttacgaaagag 522
Query: 181 ggatcgaaacaaccgttgcttaaccttacccatgcccagggaagttacatctttgagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggatcgaaacaaccgttgcttaaccttacccatgcccagggaagttacatctttgagtta 582
Query: 241 gaaagctttccagatcttcatgtttgtcgggagttggtgggtaatgcccttagcaagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaaagctttccagatcttcatgtttgtcgggagttggtgggtaatgcccttagcaagcat 642
Query: 301 gtagaagctccaaaagttactactgaggaacagcttagcactgctgaactgacactcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gtagaagctccaaaagttactactgaggaacagcttagcactgctgaactgacactcagg 702
Query: 361 ttgaaactattgcaagaagatagtaagttgcagaaactttttaaggaactcgtggctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttgaaactattgcaagaagatagtaagttgcagaaactttttaaggaactcgtggctggt 762
Query: 421 ggtaagcttaccgaatcagaattttgggctacaaag 456
||||||||||||||||||||||||||||||||||||
Sbjct: 763 ggtaagcttaccgaatcagaattttgggctacaaag 798
>gnl|LJGI|FS362311 similar to UniRef100_Q1RSH7 Cluster: General transcription factor IIH
component, related; n=1; Medicago truncatula|Rep: General
transcription factor IIH component, related - Medicago
truncatula (Barrel medic), partial (20%)
Length = 754
Score = 452 bits (228), Expect = e-126
Identities = 228/228 (100%)
Strand = Plus / Minus
Query: 1525 ccaataacagcacaaaaccttattagtaagacagcgagactgaaagaggctatatcacaa 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ccaataacagcacaaaaccttattagtaagacagcgagactgaaagaggctatatcacaa 695
Query: 1585 atttactctaaacttgaggaaataaaggtatctgcacagtcagacctgcggcatcaggtt 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atttactctaaacttgaggaaataaaggtatctgcacagtcagacctgcggcatcaggtt 635
Query: 1645 tcgcttattgtccatcctatgcagcaggctttggatgctgccttgttacattatgatgct 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tcgcttattgtccatcctatgcagcaggctttggatgctgccttgttacattatgatgct 575
Query: 1705 gacattaagaaaagaaatgcaagaggacagaagcctaatggtgtttag 1752
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gacattaagaaaagaaatgcaagaggacagaagcctaatggtgtttag 527