Miyakogusa Predicted Gene
- Lj5g3v1696900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1696900.1 Non Chatacterized Hit- tr|F6TM98|F6TM98_HORSE
Uncharacterized protein OS=Equus caballus GN=MUL1
PE=4,29.19,1e-18,seg,NULL; RING/U-box,NULL; UNCHARACTERIZED RING ZINC
FINGER-CONTAINING PROTEIN,NULL; GIDE,E3 Ubiquit,CUFF.55729.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81599 similar to UniRef100_A7PU46 Cluster: Chromosome... 593 e-169
gnl|LJGI|AV766525 similar to UniRef100_Q1RSJ8 Cluster: Zinc fing... 589 e-167
>gnl|LJGI|TC81599 similar to UniRef100_A7PU46 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 528
Score = 593 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 1 atgattccttggggcggtatcagttgttgtttgagtgctgctgctctttaccttcttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgattccttggggcggtatcagttgttgtttgagtgctgctgctctttaccttcttggc 289
Query: 61 agaagcagtggcagggatgcggaacttcttaaatctgtgacacgggttaatcagttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agaagcagtggcagggatgcggaacttcttaaatctgtgacacgggttaatcagttgaag 349
Query: 121 gagctagcacaactgttggatgcggatatattacccttggttgtttcaatttctggaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gagctagcacaactgttggatgcggatatattacccttggttgtttcaatttctggaaga 409
Query: 181 gttggttctgaaaacccaattaactgtgaattcagcagtttaagaggcgcaatagttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gttggttctgaaaacccaattaactgtgaattcagcagtttaagaggcgcaatagttgaa 469
Query: 241 gaaacagcagagcaacattttcttaaacacaatgatgctggttcctggatacaagattc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaaacagcagagcaacattttcttaaacacaatgatgctggttcctggatacaagattc 528
>gnl|LJGI|AV766525 similar to UniRef100_Q1RSJ8 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (28%)
Length = 550
Score = 589 bits (297), Expect = e-167
Identities = 297/297 (100%)
Strand = Plus / Minus
Query: 727 cggtacatcttggaaagacagcgccgcaacgaaatgcaaagaagggttcttgctgccgct 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cggtacatcttggaaagacagcgccgcaacgaaatgcaaagaagggttcttgctgccgct 491
Query: 787 gctgctaagaggttgggacacgataatgaaggtgaaaaggctgacggcttagtagacagt 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gctgctaagaggttgggacacgataatgaaggtgaaaaggctgacggcttagtagacagt 431
Query: 847 gctaaaagggaacgcttaattccagatttgtgtgtaatatgccttgagaaggaatataat 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gctaaaagggaacgcttaattccagatttgtgtgtaatatgccttgagaaggaatataat 371
Query: 907 tctgtttttgttccgtgtgggcatatgtgctgctgtacaggttgctcttcacacttgacc 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tctgtttttgttccgtgtgggcatatgtgctgctgtacaggttgctcttcacacttgacc 311
Query: 967 agttgtcctctttgccggcgacagatagagaaggtcgtgaagacttttcgccattga 1023
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agttgtcctctttgccggcgacagatagagaaggtcgtgaagacttttcgccattga 254