Miyakogusa Predicted Gene
- Lj5g3v1696800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1696800.1 Non Chatacterized Hit- tr|I0YUY1|I0YUY1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,31.21,2e-16,SUBFAMILY NOT NAMED,NULL; SYNAPSE-ASSOCIATED
PROTEIN,NULL; coiled-coil,NULL; BSD domain-like,NULL; B,CUFF.55720.1
(1447 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024278 similar to UniRef100_A7NWD3 Cluster: Chromosom... 1257 0.0
gnl|LJGI|TC82594 similar to UniRef100_A7NWD3 Cluster: Chromosome... 52 1e-05
>gnl|LJGI|GO024278 similar to UniRef100_A7NWD3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 638
Score = 1257 bits (634), Expect = 0.0
Identities = 637/638 (99%)
Strand = Plus / Plus
Query: 799 ggaggtaaacctgaggttggtggtgaaagtgtggagaagaaggtggatacccagttgcaa 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggtaaacctgaggttggtggtgaaagtgtggagaagaaggtggatacccagttgcaa 60
Query: 859 attggtggctctggtagtgctaacaatgagggtgaggcaaagagaatgagtgcggaagag 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attggtggctctggtagtgctaacaatgagggtgaggcaaagagaatgagtgcggaagag 120
Query: 919 gtgcagcattcaggggaggaggagactaaagtggaagggaaagatagtttcttgcaaagc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgcagcattcaggggaggaggagactaaagtggaagggaaagatagtttcttgcaaagc 180
Query: 979 aaggaagttggcaaggagatggagaagtctgttcgggaattgcgagatgagaaatcggaa 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggaagttggcaaggagatggagaagtctgttcgggaattgcgagatgagaaatcggaa 240
Query: 1039 gctggtaatgagatgggtggtgggtgtaaggtagctacggaggaggctggtgtggacaaa 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctggtaatgagatgggtggtgggtgtaaggtagctacggaggaggctggtgtggacaaa 300
Query: 1099 gcatcaaagtcactagtcggtggtgatggtgcgagcaagagtgattctgcggctgaatct 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcatcaaagtcactagtcggtggtgatggtgcgagcaagagtgattctgcggctgaatct 360
Query: 1159 gatgggaaggtggtgaaggaaatggagggtggagatggaaaatctactaggaagaataat 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgggaaggtggtgaaggaaatggagggtggagatggaaaatctactaggaagaataat 420
Query: 1219 gagtcttcagtggttgaaagtcagaagtcagcaaatgtggaggaggatgaggaggaggaa 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagtcttcagtggttgaaagtcagaagtcagcaaatgtggaggaggatgaggaggaggaa 480
Query: 1279 gatcttggctgggatgaaattgaggatcttagcagtgttgatgaaaagaaagtgagtcaa 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatcttggctgggatgaaattgaggatcttagcagtgttgatgaaaagaaagtgagtcaa 540
Query: 1339 agtggtagcacaagtcaagttgatttgcgcaagcgccttagtactgctgaagatgatgaa 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtggtagcacaagtcaagttgatttgcgcaagcgccttagtactgctgaagatgatgaa 600
Query: 1399 gacttgagctgggacattgaagatgatgatgagcctgc 1436
|||||||||||||||||||||||| |||||||||||||
Sbjct: 601 gacttgagctgggacattgaagataatgatgagcctgc 638
>gnl|LJGI|TC82594 similar to UniRef100_A7NWD3 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 865
Score = 52.0 bits (26), Expect = 1e-05
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 730 gaagaggaggagttgagttgggattttgaagaagatgttgatgatg 775
||||||||||| ||||| ||||||||||| || |||| ||||||||
Sbjct: 2 gaagaggaggatttgagctgggattttgatgatgatgatgatgatg 47