Miyakogusa Predicted Gene
- Lj5g3v1696780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1696780.1 tr|E8ZCI3|E8ZCI3_HELAN Auxin binding protein
(Fragment) OS=Helianthus annuus GN=abp1 PE=4
SV=1,77.59,4e-19,AUXINBINDNGP,Auxin-binding protein; RmlC-like
cupins,RmlC-like cupin domain; Auxin_BP,Auxin-binding ,CUFF.55711.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58311 similar to UniRef100_Q49RB8 Cluster: Auxin-bind... 1148 0.0
gnl|LJGI|FS334789 similar to UniRef100_Q49RB8 Cluster: Auxin-bin... 797 0.0
gnl|LJGI|DC594086 similar to UniRef100_Q49RB8 Cluster: Auxin-bin... 408 e-113
gnl|LJGI|TC75659 similar to UniRef100_P33490 Cluster: Auxin-bind... 313 7e-85
gnl|LJGI|BP060573 homologue to UniRef100_P33488 Cluster: Auxin-b... 182 2e-45
>gnl|LJGI|TC58311 similar to UniRef100_Q49RB8 Cluster: Auxin-binding protein 1; n=2;
Populus tomentosa|Rep: Auxin-binding protein 1 - Populus
tomentosa (Chinese white poplar), partial (87%)
Length = 841
Score = 1148 bits (579), Expect = 0.0
Identities = 579/579 (100%)
Strand = Plus / Plus
Query: 1 atggtactagaatgttcttgtgtgaaactgatgctgttcatctcattttctgccatagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atggtactagaatgttcttgtgtgaaactgatgctgttcatctcattttctgccatagct 166
Query: 61 cttgcttcttcttctccatgctctatcactgagttgccactggtgagaaatatcagtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cttgcttcttcttctccatgctctatcactgagttgccactggtgagaaatatcagtgag 226
Query: 121 attcctcaggataactatggcaggccaggtctctctcacataactgttgcaggctcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 attcctcaggataactatggcaggccaggtctctctcacataactgttgcaggctcaatc 286
Query: 181 ttgcatggcttgaaagaggttgaagtatggcttcaaacattttcacccggaacacgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttgcatggcttgaaagaggttgaagtatggcttcaaacattttcacccggaacacgcacc 346
Query: 241 ccaattcacaggcattcctgtgaagaagtttttattgttctcaaaggaagtggaactctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ccaattcacaggcattcctgtgaagaagtttttattgttctcaaaggaagtggaactctt 406
Query: 301 tatcttgcatcaaattcacatggaaaatgccctggacagccacaggagcattttgtcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tatcttgcatcaaattcacatggaaaatgccctggacagccacaggagcattttgtcttt 466
Query: 361 ccaaatagcacatttcatattccgcttaatgatgctcatcagctttggaacaccaatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccaaatagcacatttcatattccgcttaatgatgctcatcagctttggaacaccaatgag 526
Query: 421 catgaggatttacaagttcttgttataatatcccgtccgccagttaaagtgtttatatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 catgaggatttacaagttcttgttataatatcccgtccgccagttaaagtgtttatatat 586
Query: 481 gatgactggtccatgcctcacattgcagctagattgaaattcccctactactgggatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gatgactggtccatgcctcacattgcagctagattgaaattcccctactactgggatgaa 646
Query: 541 cactgttatcaagatactccaaaagacgaactatgatta 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 647 cactgttatcaagatactccaaaagacgaactatgatta 685
>gnl|LJGI|FS334789 similar to UniRef100_Q49RB8 Cluster: Auxin-binding protein 1; n=2;
Populus tomentosa|Rep: Auxin-binding protein 1 - Populus
tomentosa (Chinese white poplar), partial (58%)
Length = 821
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 1 atggtactagaatgttcttgtgtgaaactgatgctgttcatctcattttctgccatagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atggtactagaatgttcttgtgtgaaactgatgctgttcatctcattttctgccatagct 73
Query: 61 cttgcttcttcttctccatgctctatcactgagttgccactggtgagaaatatcagtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cttgcttcttcttctccatgctctatcactgagttgccactggtgagaaatatcagtgag 133
Query: 121 attcctcaggataactatggcaggccaggtctctctcacataactgttgcaggctcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 attcctcaggataactatggcaggccaggtctctctcacataactgttgcaggctcaatc 193
Query: 181 ttgcatggcttgaaagaggttgaagtatggcttcaaacattttcacccggaacacgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttgcatggcttgaaagaggttgaagtatggcttcaaacattttcacccggaacacgcacc 253
Query: 241 ccaattcacaggcattcctgtgaagaagtttttattgttctcaaaggaagtggaactctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccaattcacaggcattcctgtgaagaagtttttattgttctcaaaggaagtggaactctt 313
Query: 301 tatcttgcatcaaattcacatggaaaatgccctggacagccacaggagcattttgtcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tatcttgcatcaaattcacatggaaaatgccctggacagccacaggagcattttgtcttt 373
Query: 361 ccaaatagcacatttcatattccgcttaatgatgctcatcag 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccaaatagcacatttcatattccgcttaatgatgctcatcag 415
>gnl|LJGI|DC594086 similar to UniRef100_Q49RB8 Cluster: Auxin-binding protein 1; n=2;
Populus tomentosa|Rep: Auxin-binding protein 1 - Populus
tomentosa (Chinese white poplar), partial (58%)
Length = 590
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 197 aggttgaagtatggcttcaaacattttcacccggaacacgcaccccaattcacaggcatt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aggttgaagtatggcttcaaacattttcacccggaacacgcaccccaattcacaggcatt 353
Query: 257 cctgtgaagaagtttttattgttctcaaaggaagtggaactctttatcttgcatcaaatt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cctgtgaagaagtttttattgttctcaaaggaagtggaactctttatcttgcatcaaatt 413
Query: 317 cacatggaaaatgccctggacagccacaggagcattttgtctttccaaatagcacatttc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cacatggaaaatgccctggacagccacaggagcattttgtctttccaaatagcacatttc 473
Query: 377 atattccgcttaatgatgctcatcag 402
||||||||||||||||||||||||||
Sbjct: 474 atattccgcttaatgatgctcatcag 499
Score = 392 bits (198), Expect = e-109
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 1 atggtactagaatgttcttgtgtgaaactgatgctgttcatctcattttctgccatagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atggtactagaatgttcttgtgtgaaactgatgctgttcatctcattttctgccatagct 99
Query: 61 cttgcttcttcttctccatgctctatcactgagttgccactggtgagaaatatcagtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cttgcttcttcttctccatgctctatcactgagttgccactggtgagaaatatcagtgag 159
Query: 121 attcctcaggataactatggcaggccaggtctctctcacataactgttgcaggctcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 attcctcaggataactatggcaggccaggtctctctcacataactgttgcaggctcaatc 219
Query: 181 ttgcatggcttgaaagag 198
||||||||||||||||||
Sbjct: 220 ttgcatggcttgaaagag 237
>gnl|LJGI|TC75659 similar to UniRef100_P33490 Cluster: Auxin-binding protein T85
precursor; n=1; Nicotiana tabacum|Rep: Auxin-binding
protein T85 precursor - Nicotiana tabacum (Common
tobacco), partial (25%)
Length = 799
Score = 313 bits (158), Expect = 7e-85
Identities = 178/182 (97%), Gaps = 2/182 (1%)
Strand = Plus / Plus
Query: 400 cagctttggaacaccaatgagc-atgaggatttacaagttcttgttataatatcccgtcc 458
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagctttggaacaccaatgagccatgaggatttacaagttcttgttataatatcccgtcc 502
Query: 459 gcc-agttaaagtgtttatatatgatgactggtccatgcctcacattgcagctagattga 517
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcccagttaaagtgtttatatatgatgactggtccatgcctcacattgcagctagattga 562
Query: 518 aattcccctactactgggatgaacactgttatcaagatactccaaaagacgaactatgat 577
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 563 aattcccctactactgggatggacactgttatcaagatactccaaaagccgaactatgat 622
Query: 578 ta 579
||
Sbjct: 623 ta 624
>gnl|LJGI|BP060573 homologue to UniRef100_P33488 Cluster: Auxin-binding protein 4
precursor; n=1; Zea mays|Rep: Auxin-binding protein 4
precursor - Zea mays (Maize), partial (13%)
Length = 343
Score = 182 bits (92), Expect = 2e-45
Identities = 136/144 (94%), Gaps = 5/144 (3%)
Strand = Plus / Minus
Query: 441 tgttataatat-cccgtccgcca-gttaaagtgtttatatatgatgac-tggtccatgcc 497
||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 255 tgttataatatgcccgtccgccacgttaaagtgtttatatatgatgacntggtccatgcc 196
Query: 498 tcacattgcagct-agattgaaattcccctactac-tgggatgaacactgttatcaagat 555
|||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 195 tcaccttgcagcttagattgaaattcccctactacntgggatgaacactgttatccagat 136
Query: 556 actccaaaagacgaactatgatta 579
||||| ||||||||||||||||||
Sbjct: 135 actcccaaagacgaactatgatta 112