Miyakogusa Predicted Gene
- Lj5g3v1692550.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1692550.2 Non Chatacterized Hit- tr|C6TA39|C6TA39_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8837
PE=,90.43,0,WD40,WD40 repeat; WD-REPEAT PROTEIN,NULL; WD40 REPEAT
PROTEIN,NULL; no description,WD40/YVTN repeat-,CUFF.55709.2
(1038 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78209 similar to UniRef100_O24467 Cluster: LEC14B hom... 1774 0.0
gnl|LJGI|TC81500 similar to UniRef100_O24467 Cluster: LEC14B hom... 844 0.0
gnl|LJGI|FS318494 weakly similar to UniRef100_O24467 Cluster: LE... 68 1e-10
gnl|LJGI|TC78000 similar to UniRef100_O24467 Cluster: LEC14B hom... 54 2e-06
gnl|LJGI|TC69374 similar to UniRef100_O24467 Cluster: LEC14B hom... 54 2e-06
>gnl|LJGI|TC78209 similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1; Prunus
armeniaca|Rep: LEC14B homolog - Prunus armeniaca
(Apricot), partial (63%)
Length = 1335
Score = 1774 bits (895), Expect = 0.0
Identities = 917/923 (99%), Gaps = 1/923 (0%)
Strand = Plus / Plus
Query: 116 agaacattctaaccaaaagtttaagatggacaatcactgatacatctctttcccctgatc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaacattctaaccaaaagtttaagatggacaatcactgatacatctctttcccctgatc 61
Query: 176 aacgctatcttgtttatgccagcatgtcacccattgtgcacattgtaaatgttggatctt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aacgctatcttgtttatgccagcatgtcacccattgtgcacattgtaaatgttggatctt 121
Query: 236 ctgaaacggagtctgtagcaaatgttacggagatccatgatggcttggatttttcgtcaa 295
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 122 ctgaaacg-agtctgtagcaaatgttacggagatccatgatggcgtggatttttcgtcaa 180
Query: 296 atgatgatagaggatactcttttgggattttctctgtgaaattctcaacagatgggagag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgatgatagaggatactcttttgggattttctctgtgaaattctcaacagatgggagag 240
Query: 356 aattagttgcaggaagtagtggtgattctatctatgtatatgatcttgaagcaaataagc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattagttgcaggaagtagtggtgattctatctatgtatatgatcttgaagcaaataagc 300
Query: 416 tttcacttcgaattttagcacacatgtctgatgtgaatactgtatgttttgccgatgaaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttcacttcgaattttagcacacatgtctgatgtgaatactgtatgttttgccgatgaaa 360
Query: 476 ctagccatcttatttactctggaagtgatgatagctcctgcaaggtttgggatcggcgct 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctagccatcttatttactctggaagtgatgatagctcctgcaaggtttgggatcggcgct 420
Query: 536 gcttagtttctaaaggcaagccagcaggggttttgatgggacaccttgagggcattacat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcttagtttctaaaggcaagccagcaggggttttgatgggacaccttgagggcattacat 480
Query: 596 ttattgatagccgtggagatggacgttatttcatttcaaatggtaaagatcaaactatca 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttattgatagccgtggagatggacgttatttcatttcaaatggtaaagatcaaactatca 540
Query: 656 aactctgggacatacgcaaaatgtcatccaatgctacttgcaaccctgcacatagaagtc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactctgggacatacgcaaaatgtcatccaatgctacttgcaaccctgcacatagaagtc 600
Query: 716 atgaatgggactacaggtggatggattatccaacacaagcaaaagaattgaatcaccctt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgaatgggactacaggtggatggattatccaacacaagcaaaagaattgaatcaccctt 660
Query: 776 gcgatcagtcagtggctacatatagaggccattcagtcttacgcactcttgtccgctgct 835
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 gcgatcagtcagtggctacatatagaggccattcagtcttacgcactcctgtccgctgct 720
Query: 836 ttttctctccagcttttagcactggccagaagtacatctatactggatcacacaatgcat 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttttctctccagcttttagcactggccagaagtacatctatactggatcacacaatgcat 780
Query: 896 gtgtttacatatatgatttggtgactggagctcaagttgcaacactcaagcaccacaaat 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgtttacatatatgatttggtgactggagctcaagttgcaacactcaagcaccacaaat 840
Query: 956 cacctgtaagagattgcagttggcaccccttccaaactatgcttgttagctcttcttggg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 841 cacctgtaagagattgcagttggcaccccttccaaactatgcttgttagctttttttggg 900
Query: 1016 acggagatatcgtaaaatgggaa 1038
|||||||||| ||||||||||||
Sbjct: 901 acggagatattgtaaaatgggaa 923
>gnl|LJGI|TC81500 similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1; Prunus
armeniaca|Rep: LEC14B homolog - Prunus armeniaca
(Apricot), partial (44%)
Length = 1017
Score = 844 bits (426), Expect = 0.0
Identities = 439/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 1 atggctagtcgagcatatgtgtctcagttttcagctgatggttctctatttgttgctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atggctagtcgagcatatgtgtctcagttttcagctgatggttctctatttgttgctggg 557
Query: 61 ttccagggaagccacataaaaatttacaatgtggacaaaggttggaaagttcagaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttccagggaagccacataaaaatttacaatgtggacaaaggttggaaagttcagaagaac 617
Query: 121 attctaaccaaaagtttaagatggacaatcactgatacatctctttcccctgatcaacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attctaaccaaaagtttaagatggacaatcactgatacatctctttcccctgatcaacgc 677
Query: 181 tatcttgtttatgccagcatgtcacccattg-tgcacattgtaaatgttggatcttctga 239
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 678 tatcttgtttatgccagcatgtcacccaggggtgcacattgtaaatgttggatcttctga 737
Query: 240 aacggagtctgtagcaaatgttacggagatccatgatggcttggatttttcgtcaaatga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aacggagtctgtagcaaatgttacggagatccatgatggcttggatttttcgtcaaatga 797
Query: 300 tgatagaggatactcttttgggattttctctgtgaaattctcaacagatgggagagaatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tgatagaggatactcttttgggattttctctgtgaaattctcaacagatgggagagaatt 857
Query: 360 agttgcaggaagtagtggtgattctatctatgtatatgatcttgaagcaaataagctttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 agttgcaggaagtagtggtgattctatctatgtatatgatcttgaagcaaataagctttc 917
Query: 420 acttcgaattttagcacacatg 441
||||||||||||||||||||||
Sbjct: 918 acttcgaattttagcacacatg 939
>gnl|LJGI|FS318494 weakly similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1;
Prunus armeniaca|Rep: LEC14B homolog - Prunus armeniaca
(Apricot), partial (44%)
Length = 789
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 28 ttttcagctgatggttctctatttgttgctgggttccagggaagccacat 77
||||||| |||||||||||| ||| ||||||| |||||||||||||||||
Sbjct: 418 ttttcagatgatggttctctttttattgctggattccagggaagccacat 467
>gnl|LJGI|TC78000 similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1; Prunus
armeniaca|Rep: LEC14B homolog - Prunus armeniaca
(Apricot), partial (28%)
Length = 627
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 903 catatatgatttggtgactggagctcaagttgcaa 937
||||||||| ||||||||||||||||||||||||
Sbjct: 271 catatatgacctggtgactggagctcaagttgcaa 305
>gnl|LJGI|TC69374 similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1; Prunus
armeniaca|Rep: LEC14B homolog - Prunus armeniaca
(Apricot), partial (29%)
Length = 726
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 903 catatatgatttggtgactggagctcaagttgcaa 937
||||||||| ||||||||||||||||||||||||
Sbjct: 274 catatatgacctggtgactggagctcaagttgcaa 308