Miyakogusa Predicted Gene
- Lj5g3v1681450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1681450.1 tr|Q7XRU6|Q7XRU6_ORYSJ OSJNBa0055C08.12 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0055C08.12
,45.61,3e-18,GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE
1,NULL,CUFF.55698.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73901 similar to UniRef100_A7PB20 Cluster: Chromosome... 1417 0.0
gnl|LJGI|TC78085 similar to UniRef100_A7PB20 Cluster: Chromosome... 710 0.0
gnl|LJGI|TC73412 homologue to UniRef100_A7PB20 Cluster: Chromoso... 549 e-156
gnl|LJGI|AV764861 383 e-105
gnl|LJGI|DC595479 homologue to UniRef100_A7PB20 Cluster: Chromos... 264 7e-70
gnl|LJGI|AV773927 107 1e-22
>gnl|LJGI|TC73901 similar to UniRef100_A7PB20 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (94%)
Length = 1471
Score = 1417 bits (715), Expect = 0.0
Identities = 721/723 (99%)
Strand = Plus / Plus
Query: 1 atggttcgacccggaaacccaatggagctccagatggcgtaccaggacgcttggcgggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atggttcgacccggaaacccaatggagctccagatggcgtaccaggacgcttggcgggtc 528
Query: 61 tgccatccggatttcaagcgacccttttcttctctcgaagatgcctgcgagagattattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgccatccggatttcaagcgacccttttcttctctcgaagatgcctgcgagagattattg 588
Query: 121 ccatatcatgttgtggcagactatgaagcagaagaggatgataggatccttgattctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ccatatcatgttgtggcagactatgaagcagaagaggatgataggatccttgattctgac 648
Query: 181 accactggccaagtgctttcaaggtcccagcagtgggataataatattgctgctaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 accactggccaagtgctttcaaggtcccagcagtgggataataatattgctgctaaaatt 708
Query: 241 gctgagtttacagcaacttttgagaaacaagcacttgccttcaacataatatcccaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gctgagtttacagcaacttttgagaaacaagcacttgccttcaacataatatcccaaaag 768
Query: 301 agaaacttgggtgaattccggtctgaggagagattgatgattgaacaggcacttctccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agaaacttgggtgaattccggtctgaggagagattgatgattgaacaggcacttctccaa 828
Query: 361 gaagaaaagcgagctctgatggccggtcgtgaagcacatgaggctaaacttcggatggcg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gaagaaaagcgagctctgatggccggtcgtgaagcacatgaggctaaacttcggatggca 888
Query: 421 gcaatgtatcaagctgagcaggcccgggcagaatcacactctcatgctgaaatgatgtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gcaatgtatcaagctgagcaggcccgggcagaatcacactctcatgctgaaatgatgtcg 948
Query: 481 cgagcccccataagagggagtgcacttgggtcccaaggcagtggtgatatgatgggccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 cgagcccccataagagggagtgcacttgggtcccaaggcagtggtgatatgatgggccat 1008
Query: 541 gacatgggagagcaggatcagggaggtcacccaggtgatatgatgaatggatgggggaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 gacatgggagagcaggatcagggaggtcacccaggtgatatgatgaatggatgggggaac 1068
Query: 601 aatgcacacagagaagagaaggagccatctgaggatttcttgaatgatgaagctgagaat 660
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 aatgcacagagagaagagaaggagccatctgaggatttcttgaatgatgaagctgagaat 1128
Query: 661 ggagacacaggcacacaggatggttggcgtgaagttggtgaatttgatttgaatgctagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ggagacacaggcacacaggatggttggcgtgaagttggtgaatttgatttgaatgctagg 1188
Query: 721 tga 723
|||
Sbjct: 1189 tga 1191
>gnl|LJGI|TC78085 similar to UniRef100_A7PB20 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1322
Score = 710 bits (358), Expect = 0.0
Identities = 373/378 (98%)
Strand = Plus / Plus
Query: 1 atggttcgacccggaaacccaatggagctccagatggcgtaccaggacgcttggcgggtc 60
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 435 atggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgggtc 494
Query: 61 tgccatccggatttcaagcgacccttttcttctctcgaagatgcctgcgagagattattg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 495 tgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagagattattg 554
Query: 121 ccatatcatgttgtggcagactatgaagcagaagaggatgataggatccttgattctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 555 ccatatcatgttgtggcagactatgaagcagaagaggatgataggatccttgactctgac 614
Query: 181 accactggccaagtgctttcaaggtcccagcagtgggataataatattgctgctaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 accactggccaagtgctttcaaggtcccagcagtgggataataatattgctgctaaaatt 674
Query: 241 gctgagtttacagcaacttttgagaaacaagcacttgccttcaacataatatcccaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gctgagtttacagcaacttttgagaaacaagcacttgccttcaacataatatcccaaaag 734
Query: 301 agaaacttgggtgaattccggtctgaggagagattgatgattgaacaggcacttctccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agaaacttgggtgaattccggtctgaggagagattgatgattgaacaggcacttctccaa 794
Query: 361 gaagaaaagcgagctctg 378
|||||||| |||||||||
Sbjct: 795 gaagaaaaacgagctctg 812
Score = 543 bits (274), Expect = e-154
Identities = 325/341 (95%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 385 ggtcgtgaagcacatgaggctaaacttcggatggcggcaatgtatcaagctgagcaggcc 444
||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 852 ggtcgtgaagcccatgaggctaaactccggatggcggccatgtatcaagctgagcaggcc 911
Query: 445 cgggcagaatcacactctcatgctgaaatgatgtcgcgagcccccataagagggagtgca 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 cgggcagaatcacactctcatgctgaaatgatgtcgcgagcccccataagagggagtgca 971
Query: 505 cttgggtcccaaggcagtggtgatatgatgggccatgacatgggagagcaggatcaggga 564
||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 972 cttgggtcccatggccgtggtgacatgatgggccatgacatgggagagcaggatcaggga 1031
Query: 565 ggtcacccaggtgatatgatgaatggatgggggaacaatgcacacagagaagagaaggag 624
||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||
Sbjct: 1032 ggtaacccaggtgatatgatgaatggatggggaaaccatgcacagagagaagaaaaggag 1091
Query: 625 ccatctgaggatttcttgaatgatgaagctgagaatggagacacaggcacacaggatggt 684
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1092 ccatctgaggatttcttgaatgatgaagctgagaatggagaccccggcacacaggatggt 1151
Query: 685 tggcgtgaag--ttggtgaatttgatttgaatgctaggtga 723
|||||||||| | |||||||||||||||||||||||||||
Sbjct: 1152 tggcgtgaagtatcggtgaatttgatttgaatgctaggtga 1192
>gnl|LJGI|TC73412 homologue to UniRef100_A7PB20 Cluster: Chromosome chr16
scaffold_10, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 685
Score = 549 bits (277), Expect = e-156
Identities = 292/297 (98%)
Strand = Plus / Plus
Query: 1 atggttcgacccggaaacccaatggagctccagatggcgtaccaggacgcttggcgggtc 60
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389 atggttcgacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgggtc 448
Query: 61 tgccatccggatttcaagcgacccttttcttctctcgaagatgcctgcgagagattattg 120
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 449 tgccatccagatttcaagcgacccttttcttctcttgaagatgcctgcgagagattattg 508
Query: 121 ccatatcatgttgtggcagactatgaagcagaagaggatgataggatccttgattctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 509 ccatatcatgttgtggcagactatgaagcagaagaggatgataggatccttgactctgac 568
Query: 181 accactggccaagtgctttcaaggtcccagcagtgggataataatattgctgctaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 accactggccaagtgctttcaaggtcccagcagtgggataataatattgctgctaaaatt 628
Query: 241 gctgagtttacagcaacttttgagaaacaagcacttgccttcaacataatatcccaa 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gctgagtttacagcaacttttgagaaacaagcacttgccttcaacataatatcccaa 685
>gnl|LJGI|AV764861
Length = 462
Score = 383 bits (193), Expect = e-105
Identities = 307/345 (88%)
Strand = Plus / Minus
Query: 379 atggccggtcgtgaagcacatgaggctaaacttcggatggcggcaatgtatcaagctgag 438
|||||||||||||||||||| ||| |||| |||||||||| ||||||||||||| ||||
Sbjct: 439 atggccggtcgtgaagcacaaaaggttaaatttcggatggcagcaatgtatcaagttgag 380
Query: 439 caggcccgggcagaatcacactctcatgctgaaatgatgtcgcgagcccccataagaggg 498
||||||||||||||||||| || |||| |||||||||||||||||||||| ||| ||||
Sbjct: 379 caggcccgggcagaatcaccctttcattttgaaatgatgtcgcgagcccccctaaaaggg 320
Query: 499 agtgcacttgggtcccaaggcagtggtgatatgatgggccatgacatgggagagcaggat 558
||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 319 agtgcacttgggtcccaagccagtggtgatataatgggccatgccatgggagagcaggat 260
Query: 559 cagggaggtcacccaggtgatatgatgaatggatgggggaacaatgcacacagagaagag 618
|||||||||| ||| |||||||| || |||||||||||| |||||| | || | || |
Sbjct: 259 cagggaggtccccccggtgatattattaatggatggggggccaatgcccccaaaaaaaaa 200
Query: 619 aaggagccatctgaggatttcttgaatgatgaagctgagaatggagacacaggcacacag 678
|||||||| ||||||||||| || ||| ||||||||||||||||| || ||||| | |||
Sbjct: 199 aaggagccctctgaggatttttttaattatgaagctgagaatggaaacccaggcccccag 140
Query: 679 gatggttggcgtgaagttggtgaatttgatttgaatgctaggtga 723
|||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 139 aatggttggggtgaagttggtgaattttatttgaatgctaggtga 95
>gnl|LJGI|DC595479 homologue to UniRef100_A7PB20 Cluster: Chromosome chr16
scaffold_10, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 292
Score = 264 bits (133), Expect = 7e-70
Identities = 145/149 (97%)
Strand = Plus / Plus
Query: 1 atggttcgacccggaaacccaatggagctccagatggcgtaccaggacgcttggcgggtc 60
||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 144 atggttccacccgggaacccaatggagcttcagatggcgtaccaggacgcttggcgggtc 203
Query: 61 tgccatccggatttcaagcgacccttttcttctctcgaagatgcctgcgagagattattg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 tgccatccggatttcaagcgacccttttcttctcttgaagatgcctgcgagagattattg 263
Query: 121 ccatatcatgttgtggcagactatgaagc 149
|||||||||||||||||||||||||||||
Sbjct: 264 ccatatcatgttgtggcagactatgaagc 292
>gnl|LJGI|AV773927
Length = 219
Score = 107 bits (54), Expect = 1e-22
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 643 aatgatgaagctgagaatggagacacaggcacacaggatggttggcg-tgaagttggtga 701
|||||||||||||||||||||||| | ||||| | || ||||||||| ||||||||||||
Sbjct: 219 aatgatgaagctgagaatggagaccccggcaccccggctggttggcggtgaagttggtga 160
Query: 702 atttgatttgaatgctaggtga 723
||||||||||||||||||||||
Sbjct: 159 atttgatttgaatgctaggtga 138