Miyakogusa Predicted Gene

Lj5g3v1671390.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1671390.1 tr|G7SMU3|G7SMU3_STRSU Formate--tetrahydrofolate
ligase OS=Streptococcus suis ST1 GN=fhs PE=3 SV=1,51.72,2,
,CUFF.55689.1
         (301 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025871 weakly similar to UniRef100_Q9UAL8 Cluster: Am...   315   8e-86

>gnl|LJGI|GO025871 weakly similar to UniRef100_Q9UAL8 Cluster: AmphiHox4 protein; n=1;
           Branchiostoma floridae|Rep: AmphiHox4 protein -
           Branchiostoma floridae (Florida lancelet) (Amphioxus),
           partial (10%)
          Length = 598

 Score =  315 bits (159), Expect = 8e-86
 Identities = 210/227 (92%), Gaps = 10/227 (4%)
 Strand = Plus / Plus

                                                                       
Query: 68  gtggcggaggatttcagttattggaggttttgagttggtgttgttgtttggttgatggtt 127
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtggcggaggatttcagttgttggaggttttgagttggtgttgttgtttggttgatggtt 399

                                                                       
Query: 128 tgaaggaaggaagggcttccatcgttgaagacacaaccttggtggttatggcagatgttt 187
           |||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct: 400 tgaaggaaggaatggcttccgttgttgaagacacaaccttggtggtaatggcagatgttt 459

                                                                       
Query: 188 atgttgctcagttgctgtgtagaaga--agtaacatgtgtaaatttgaacaatttcgtaa 245
           ||        |||| |||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 460 at--------gttgttgtgtagaagaagagtaacatgtgtaaatttgaacaatttcgtaa 511

                                                          
Query: 246 ctatcttgttttcctttttgtttccattctttgttcctttttaatcg 292
           || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctttcttgttttcctttttgtttccattctttgttcctttttaatcg 558