Miyakogusa Predicted Gene

Lj5g3v1669360.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1669360.1 tr|B9I9X0|B9I9X0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_572749 PE=4
SV=1,54.61,2e-17,seg,NULL,CUFF.55686.1
         (417 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO012504 similar to UniRef100_Q94F57 Cluster: Classical...   777   0.0  
gnl|LJGI|TC60556 similar to UniRef100_Q94F57 Cluster: Classical ...   769   0.0  

>gnl|LJGI|GO012504 similar to UniRef100_Q94F57 Cluster: Classical arabinogalactan
           protein 26 precursor; n=1; Arabidopsis thaliana|Rep:
           Classical arabinogalactan protein 26 precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (33%)
          Length = 596

 Score =  777 bits (392), Expect = 0.0
 Identities = 409/417 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcccttttggtcattctctgcagtactcttggccttaatggcattcacttgtccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  atggctcccttttggtcattctctgcagtactcttggccttaatggcattcacttgtccc 144

                                                                       
Query: 61  ttggccttggcttctcaacnnnnnnncatgcatgtttccaccatctcagcagcaccaact 120
           |||||||||||||||||||       ||||||||||||||||||||||||||||||||||
Sbjct: 145 ttggccttggcttctcaacaaaaaaacatgcatgtttccaccatctcagcagcaccaact 204

                                                                       
Query: 121 actttaccaggttgccctcttttatctcctacactttcaccagatattgagccactgttt 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 actttaccaggttcccctcttttatctcctacactttcaccagatattgagccactgttt 264

                                                                       
Query: 181 ccaacaccaggaaaagatgctttctctccatcagagtcttcactaccaacaattccttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaacaccaggaaaagatgctttctctccatcagagtcttcactaccaacaattccttca 324

                                                                       
Query: 241 agtccaagccctcccaacccagatatcactggtcatcaagggcatggtttggcttttcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtccaagccctcccaacccagatatcactggtcatcaagggcatggtttggcttttcca 384

                                                                       
Query: 301 ccatcagagtctatgccagctccagcaccttcttcccagggcgcatctcttccactgtac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccatcagagtctatgccagctccagcaccttcttcccagggcgcatctcttccactgtac 444

                                                                    
Query: 361 tcaattttacaattggtcatgctggtcatttgtataatgcagctttatggcatgtga 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcaattttacaattggtcatgctggtcatttgtataatgcagctttatggcatgtga 501


>gnl|LJGI|TC60556 similar to UniRef100_Q94F57 Cluster: Classical arabinogalactan
           protein 26 precursor; n=1; Arabidopsis thaliana|Rep:
           Classical arabinogalactan protein 26 precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (33%)
          Length = 756

 Score =  769 bits (388), Expect = 0.0
 Identities = 408/417 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcccttttggtcattctctgcagtactcttggccttaatggcattcacttgtccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  atggctcccttttggtcattctctgcagtactcttggccttaatggcattcacttgtccc 114

                                                                       
Query: 61  ttggccttggcttctcaacnnnnnnncatgcatgtttccaccatctcagcagcaccaact 120
           |||||||||||||||||||       ||||||||||||||||||||||||||||||||||
Sbjct: 115 ttggccttggcttctcaacaaaaaaacatgcatgtttccaccatctcagcagcaccaact 174

                                                                       
Query: 121 actttaccaggttgccctcttttatctcctacactttcaccagatattgagccactgttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 actttaccaggttgccctcttttatctcctacactttcaccagatattgagccactgttt 234

                                                                       
Query: 181 ccaacaccaggaaaagatgctttctctccatcagagtcttcactaccaacaattccttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccaacaccaggaaaagatgctttctctccatcagagtcttcactaccaacaattccttca 294

                                                                       
Query: 241 agtccaagccctcccaacccagatatcactggtcatcaagggcatggtttggcttttcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 295 agtccaagccctcccaacccagatatcactggtcatcaagggcatggtttgacttttcca 354

                                                                       
Query: 301 ccatcagagtctatgccagctccagcaccttcttcccagggcgcatctcttccactgtac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 355 ccatcagagtctatgccagctccagcaccttcttcccagggcgcatctcctccactgtac 414

                                                                    
Query: 361 tcaattttacaattggtcatgctggtcatttgtataatgcagctttatggcatgtga 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcaattttacaattggtcatgctggtcatttgtataatgcagctttatggcatgtga 471