Miyakogusa Predicted Gene
- Lj5g3v1669340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1669340.1 Non Chatacterized Hit- tr|I3SS20|I3SS20_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.76,0,TUB_2,Tubby, C-terminal, conserved site; TUBBY
PROTEIN-RELATED,NULL; TUBBY-RELATED,NULL; Tub,Tubby, ,CUFF.55684.1
(1209 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61900 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 2381 0.0
gnl|LJGI|TC62542 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 96 6e-19
gnl|LJGI|TC75692 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 56 5e-07
gnl|LJGI|TC67069 56 5e-07
gnl|LJGI|AV778913 54 2e-06
gnl|LJGI|TC57408 54 2e-06
>gnl|LJGI|TC61900 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1;
Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (87%)
Length = 1640
Score = 2381 bits (1201), Expect = 0.0
Identities = 1207/1209 (99%)
Strand = Plus / Plus
Query: 1 atgtcgtttcggagcatgattctcgacaggaagggattcgaggtgaagttcagctatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgtcgtttcggagcatgattctcgacaggaagggattcgaggtgaagttcagctatggc 188
Query: 61 acaagatccaagtcagagtcaaagagtgacaccaccataaaggagagttctttgatggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acaagatccaagtcagagtcaaagagtgacaccaccataaaggagagttctttgatggtg 248
Query: 121 gttgatgatgggttgaagcagagttgttgggctaacatgccaccagagcttctgagagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gttgatgatgggttgaagcagagttgttgggctaacatgccaccagagcttctgagagat 308
Query: 181 gtgctcatgaggattgaagcctctgagcataattggcctgcccggaagcatgtggtggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtgctcatgaggattgaagcctctgagcataattggcctgcccggaagcatgtggtggcc 368
Query: 241 tgtgccggcgtttgccggagctggagagacatcatggaggaaattgtcaaaccgccacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtgccggcgtttgccggagctggagagacatcatggaggaaattgtcaaaccgccacaa 428
Query: 301 atctcaaccaagttgacatttcctatttccttgaagcagcctggtccaagggattctctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atctcaaccaagttgacatttcctatttccttgaagcagcctggtccaagggattctctt 488
Query: 361 cttcagtgctatattaaaagaaatcgcagcaaccaaacatattatctgtttcttggttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cttcagtgctatattaaaagaaatcgcagcaaccaaacatattatctgtttcttggttta 548
Query: 421 aaccaagcttcaactgacgatggcaagttccttctagctgcacgcaagtgtcggcatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaccaagcttcaactgacgatggcaagttccttctagctgcacgcaagtgtcggcatgca 608
Query: 481 acccacactgactatataatctctctaaaccatgatgatgtgtcgagagggagtagcacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 acccacactgactatataatctctctaaaccatgatgatgtgtcgagagggagtagcacc 668
Query: 541 tatattgggaagttgagatcaaactttctgggcaccaaattcactgtgtatgatgcacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tatattgggaagttgagatcaaactttctgggcaccaaattcactgtgtatgatgcacac 728
Query: 601 cctccaatttgtggagccaaagttacaaagtctcgttccaccaggcttgttagtctcaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cctccaatttgtggagccaaagttacaaagtctcgttccaccaggcttgttagtctcaag 788
Query: 661 caagtatctccaagagttcctgcaggcaactttcccattgtgcatgtctcatatgatctg 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 789 caagtatctccaagagttcctgcaggcaaccttcccattgtgcatgtctcatatgatctg 848
Query: 721 aatgttttgggctctaggggccctagaataatgcaatgtgttatggatgccatccctgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 aatgttttgggctctaggggccctagaataatgcaatgtgttatggatgccatccctgcc 908
Query: 781 tcagctgttgaacccggaggttcggccccaacacagactcaatttcttcatagcagaatt 840
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 909 tcagctgttgaacccggaggctcggccccaacacagactcaatttcttcatagcagaatt 968
Query: 841 gacgcttctccatctatcccgttcttcagatcaaaatcaacccgcatggagaacctccca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 gacgcttctccatctatcccgttcttcagatcaaaatcaacccgcatggagaacctccca 1028
Query: 901 tctgtacctttaacttgtcaaaatgaggggatgctagtattaaaaaacaaatcccctagg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tctgtacctttaacttgtcaaaatgaggggatgctagtattaaaaaacaaatcccctagg 1088
Query: 961 tggcatgaacaactccaatgctggtgtctgaacttcaatgggcgggtgacagttgcttca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 tggcatgaacaactccaatgctggtgtctgaacttcaatgggcgggtgacagttgcttca 1148
Query: 1021 gttaaaaatttccagctggttgcttctcctagaaatggagtttctgagcaggctcaggaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 gttaaaaatttccagctggttgcttctcctagaaatggagtttctgagcaggctcaggaa 1208
Query: 1081 aatgttgttctacaattcggaaaagttggaaaggatgtgttcaccatggattaccaatat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 aatgttgttctacaattcggaaaagttggaaaggatgtgttcaccatggattaccaatat 1268
Query: 1141 ccaatctcagcctttgaagcatttgcaatatgcctcagcagctttgacaccaagatcgct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 ccaatctcagcctttgaagcatttgcaatatgcctcagcagctttgacaccaagatcgct 1328
Query: 1201 tgtgaatga 1209
|||||||||
Sbjct: 1329 tgtgaatga 1337
>gnl|LJGI|TC62542 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1;
Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (85%)
Length = 2052
Score = 95.6 bits (48), Expect = 6e-19
Identities = 102/120 (85%)
Strand = Plus / Plus
Query: 1090 ctacaattcggaaaagttggaaaggatgtgttcaccatggattaccaatatccaatctca 1149
|||||||| || ||| |||| |||||| |||| || |||||||||| || || ||||||
Sbjct: 1478 ctacaatttgggaaaattgggaaggatttgtttacaatggattaccggtaccctatctca 1537
Query: 1150 gcctttgaagcatttgcaatatgcctcagcagctttgacaccaagatcgcttgtgaatga 1209
|| ||| | || |||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1538 gcatttcaggcttttgcaatctgcctcagcagctttgataccaagattgcttgtgaatga 1597
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 231 tgtggtggcctgtgccggcgtttgccggagctggag 266
||||||||| |||||||| |||||||||||||||||
Sbjct: 619 tgtggtggcgtgtgccggagtttgccggagctggag 654
>gnl|LJGI|TC75692 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3;
n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein
3 - Arabidopsis thaliana (Mouse-ear cress), partial
(47%)
Length = 962
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 231 tgtggtggcctgtgccggcgtttgccggagctggag 266
||||||||| |||||||| |||||||||||||||||
Sbjct: 458 tgtggtggcgtgtgccggagtttgccggagctggag 493
>gnl|LJGI|TC67069
Length = 989
Score = 56.0 bits (28), Expect = 5e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 961 tggcatgaacaactccaatgctggtgtctgaacttcaatgggcgggtgacagttgcttca 1020
||||||||||| || |||||||||||||| ||||||| || || ||||| || || ||
Sbjct: 164 tggcatgaacagctgcaatgctggtgtctcaacttcaggggccgagtgactgtcgcgtcg 223
Query: 1021 gttaaaaatttccagctggttgct 1044
|| || |||||||||||| |||||
Sbjct: 224 gtcaagaatttccagctgattgct 247
>gnl|LJGI|AV778913
Length = 479
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1157 aagcatttgcaatatgcctcagcagctttgacaccaagatcgcttgtgaat 1207
|||| |||||||||||| | ||||||||||||||||| | ||||||||||
Sbjct: 139 aagcttttgcaatatgcttaagcagctttgacaccaaactagcttgtgaat 89
>gnl|LJGI|TC57408
Length = 1745
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1157 aagcatttgcaatatgcctcagcagctttgacaccaagatcgcttgtgaat 1207
|||| |||||||||||| | ||||||||||||||||| | ||||||||||
Sbjct: 1466 aagcttttgcaatatgcttaagcagctttgacaccaaactagcttgtgaat 1516