Miyakogusa Predicted Gene
- Lj5g3v1664160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1664160.1 Non Chatacterized Hit- tr|I1NB36|I1NB36_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.4,0,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; zf-C2H2,Zinc finger,
C2H2; zf-C2H2_jaz,Zinc finger, double-str,CUFF.55668.1
(543 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 170 6e-42
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 139 2e-32
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 98 7e-20
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 90 2e-17
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 84 1e-15
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 82 4e-15
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 66 2e-10
gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosom... 52 4e-06
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 170 bits (86), Expect = 6e-42
Identities = 203/242 (83%)
Strand = Plus / Plus
Query: 151 cctgagccatcatgtgttcaccacaaccctgctcgtgcattaggagacctcactggcatt 210
||||| || |||||||| ||||||| ||| || | ||| | || |||||||||||||||
Sbjct: 661 cctgaaccttcatgtgtccaccacagcccggcaagagcactgggcgacctcactggcatt 720
Query: 211 aaaaaacactacagcagaaaacatggtgagaagaaatggaaatgtgacaagtgctccaaa 270
|| || |||| | ||||||| || || ||||| ||||||||||||||||||||||||||
Sbjct: 721 aagaagcacttctgcagaaagcacggcgagaaaaaatggaaatgtgacaagtgctccaag 780
Query: 271 agatatgctgtccaatctgattggaaggcccaccagaaaacatgtggcaccaaggaatac 330
| || ||||| |||||||| |||| || ||| |||| ||||||||| ||||||||
Sbjct: 781 aagtacgctgttcaatctgactggagagcacactccaaaatatgtggcacgaaggaatat 840
Query: 331 aaatgtgattgtggcaccattttttccaggagagatagtttcatcacccacagagctttc 390
|| ||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 841 aagtgtgactgtggaaccatcttttccagaagagatagtttcatcacccacagagctttc 900
Query: 391 tg 392
||
Sbjct: 901 tg 902
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 139 bits (70), Expect = 2e-32
Identities = 231/284 (81%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 13 agattcgtctgtgagatctgcagcaaagggtttcagagggaccaaaaccttcagttgcac 72
|||||||| || || || |||| ||||||||||||||||||||| || || ||| | |||
Sbjct: 272 agattcgtatgcgaaatttgcaacaaagggtttcagagggaccagaatctgcagcttcac 331
Query: 73 cgcagaggtcacaatcttccatggaaactgaagcagagaacaagcagtgaggtggtgaag 132
|| |||||||||||||| |||||||| |||| |||||| || |||| ||| ||||| |
Sbjct: 332 cggagaggtcacaatctgccatggaagctgaggcagaggacgagca---aggaggtgagg 388
Query: 133 aaacgagtgtatgtgtgccctgagccatcatgtgttcaccacaaccctgctcgtgcatta 192
|| | |||||||| ||||| || ||| | ||||| ||||| ||||| |||| || ||
Sbjct: 389 aagagggtgtatgtctgcccggaaccaacgtgtgtccaccatgacccttctcgagcgttg 448
Query: 193 ggagacctcactggcattaaaaaacactacagcagaaaacatggtgagaagaaatggaaa 252
|| || ||||| || |||||||| |||| | ||||||| || ||||||||||| ||||||
Sbjct: 449 ggtgatctcaccggaattaaaaagcacttctgcagaaagcacggtgagaagaagtggaaa 508
Query: 253 tgtgacaagtgctccaaaagatatgctgtccaatctgattggaa 296
|| || || |||||||| | |||||| || ||||||||||||||
Sbjct: 509 tgcgagaaatgctccaagaaatatgcagttcaatctgattggaa 552
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 97.6 bits (49), Expect = 7e-20
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 214 aaacactacagcagaaaacatggtgagaagaaatggaaatgtgacaagtgctccaaaaga 273
||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| | |
Sbjct: 350 aaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaagtgctccaagaaa 409
Query: 274 tatgctgtccaatctgattggaaggccca 302
|| ||||| || || ||||||||||||||
Sbjct: 410 tacgctgttcattccgattggaaggccca 438
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 89.7 bits (45), Expect = 2e-17
Identities = 126/153 (82%)
Strand = Plus / Minus
Query: 196 gacctcactggcattaaaaaacactacagcagaaaacatggtgagaagaaatggaaatgt 255
|||||||| ||||| || || |||| ||||||||| || ||||||||||| ||||| |||
Sbjct: 273 gacctcaccggcatcaagaagcacttcagcagaaagcacggtgagaagaagtggaagtgt 214
Query: 256 gacaagtgctccaaaagatatgctgtccaatctgattggaaggcccaccagaaaacatgt 315
|| ||||||||||| | ||| || |||| ||| |||||||| || ||| |||||||
Sbjct: 213 gagaagtgctccaagaaatacgcagtcccatcagattggaaagctcacacccaaacatgc 154
Query: 316 ggcaccaaggaatacaaatgtgattgtggcacc 348
||||||| ||| ||||| ||||| |||||||||
Sbjct: 153 ggcaccagggagtacaagtgtgactgtggcacc 121
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 83.8 bits (42), Expect = 1e-15
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 13 agattcgtctgtgagatctgcagcaaagggtttcagagggaccaaaaccttcagttgcac 72
|||||||| || || || |||| ||||||||||||||||||||| || || ||| | |||
Sbjct: 292 agattcgtatgcgaaatttgcaacaaagggtttcagagggaccagaatctgcagcttcac 351
Query: 73 cgcagaggtcacaatcttccatggaaactgaagcagag 110
|| |||||||||||||| |||||||| |||| ||||||
Sbjct: 352 cggagaggtcacaatctgccatggaagctgaggcagag 389
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 224 gcagaaaacatggtgagaagaaatggaaatgtgacaagtgctccaaaagatatgctgtcc 283
||||||||||||| |||||||| |||||||||||||||||||| || | |||||| || |
Sbjct: 417 gcagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttc 476
Query: 284 aatctgattggaa 296
|||| ||||||||
Sbjct: 477 aatcggattggaa 489
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 225 cagaaaacatggtgagaagaaatggaaatgtgacaagtgctccaa 269
|||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 11 cagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaa 55
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 369 tttcatcacccacagagctttctgtgatgcatta 402
|||||| ||||||||||| |||||||||||||||
Sbjct: 154 tttcataacccacagagccttctgtgatgcatta 187
>gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 618
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 333 atgtgattgtggcaccattttttccaggagagatagtttcatcacccacagagctttctg 392
|||||||||||||||| | || || ||| | |||||||||||||| || || || |||||
Sbjct: 298 atgtgattgtggcaccctcttctcaaggcgtgatagtttcatcactcatagggccttctg 357
Query: 393 tgatgc 398
||||||
Sbjct: 358 tgatgc 363