Miyakogusa Predicted Gene

Lj5g3v1653110.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1653110.1 Non Chatacterized Hit- tr|I1JFH6|I1JFH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.18,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; GH3,GH3 auxin-responsive
promoter,CUFF.55663.1
         (1803 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77138 similar to UniRef100_A7Q094 Cluster: Chromosome...   151   2e-35

>gnl|LJGI|TC77138 similar to UniRef100_A7Q094 Cluster: Chromosome chr7 scaffold_42,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_42, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 866

 Score =  151 bits (76), Expect = 2e-35
 Identities = 232/284 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1508 cacttgatacgaatgttcttcaggaatgttgctctgtagttgaagagcaactagactatg 1567
            |||||||||| ||||| ||||||||||| |||  ||  |||||||||||||| ||||| |
Sbjct: 120  cacttgataccaatgtgcttcaggaatgctgcattgcggttgaagagcaactggactacg 179

                                                                        
Query: 1568 tgtataggcatttacgcaatgataagtcaataggaccacttgagatacgtgtggtggagc 1627
            | ||| | ||||| ||| ||||   ||| ||||| |||||||||||||| ||||| ||| 
Sbjct: 180  tatattgtcatttgcgccatgacgggtccatagggccacttgagatacgcgtggtagagg 239

                                                                        
Query: 1628 caggaacatttgaggcattgatggacttgagcattagcaatggagcttcagtgaatcagt 1687
            |||||||||||||  ||||| ||||||||  |||||||   ||||||||| |  ||||||
Sbjct: 240  caggaacatttgatacattgttggacttgttcattagcctaggagcttcaatccatcagt 299

                                                                        
Query: 1688 acaaaacaccaaggtgcattaagtctagtaaagcattcaatctgctcaattctagagtta 1747
            || |||| || ||| |||||||||||  ||||||| | || |||||||| |||| |||||
Sbjct: 300  accaaacgcccaggggcattaagtctgataaagcacttaacctgctcaactctaaagtta 359

                                                        
Query: 1748 atgcttcctttttcagtcctagagttcccagttggggatctaag 1791
             |||||| |||||||| ||||||  ||||   ||||||||||||
Sbjct: 360  ctgcttcttttttcagccctagatatccccaatggggatctaag 403