Miyakogusa Predicted Gene
- Lj5g3v1631030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1631030.1 Non Chatacterized Hit- tr|A5APC0|A5APC0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,85.71,0,no
description,NULL; LSM,Ribonucleoprotein LSM domain; SMALL NUCLEAR
RIBONUCLEOPROTEIN SM,NULL; snRN,CUFF.55657.1
(420 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76985 homologue to UniRef100_A7PS14 Cluster: Chromoso... 291 2e-78
gnl|LJGI|AU088900 homologue to UniRef100_A7PS14 Cluster: Chromos... 180 5e-45
gnl|LJGI|AV414240 homologue to UniRef100_Q38JH9 Cluster: Glycine... 161 4e-39
>gnl|LJGI|TC76985 homologue to UniRef100_A7PS14 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 1032
Score = 291 bits (147), Expect = 2e-78
Identities = 275/317 (86%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 10 ctttcccttctcaaaactgcccaagggcacccaatgttggtggagctgaaaaatggggag 69
|||||||||||||| ||||| ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 13 ctttcccttctcaagactgctcaaggccaccctatgttggtggagctgaaaaacggggag 72
Query: 70 acttataatgggcatttggttaactgtgatacatggatgaacatccatctccgggaagtc 129
|| || || |||||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 73 acatacaacgggcatttggttaattgcgatacatggatgaacatccatcttcgagaagtc 132
Query: 130 atctgtacctctaaagaaggaactgaattttggcgtatgcctgaatgctacattcgcgga 189
|| || ||| |||||| ||| | ||||||||| |||||||| ||||||||||| ||
Sbjct: 133 atttgcaccaataaagatggagatagattttggcggatgcctgagtgctacattcgaggc 192
Query: 190 aataccattaagtaccttcgggttcctgatgaggttattgacaaagtccaggaagaaacc 249
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 193 aatacaattaagtaccttcgagttcctgatgaggttattgacaaagttcaggaagaaacc 252
Query: 250 aaaacccgcaccgatcgcaaaccacctggtgtgggacgcggaagaggaa---gaggtagg 306
|| | ||| || ||||||||||||||||| || ||||| || || |||| ||||||||
Sbjct: 253 aagagccgtactgatcgcaaaccacctggcgttggacgtgggaggggaagaggaggtagg 312
Query: 307 gaggatggtcctggtgg 323
||||| ||| |||||||
Sbjct: 313 gaggaaggtgctggtgg 329
>gnl|LJGI|AU088900 homologue to UniRef100_A7PS14 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 208
Score = 180 bits (91), Expect = 5e-45
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 2 tgttgcccctttcccttctcaaaactgcccaagggcacccaatgttggtggagctgaaaa 61
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 65 tgttgcccctttcccttctcaaaactgcccaagggcaccnaatgttggtgganctgaaaa 124
Query: 62 atggggagacttataatgggcatttggttaactgtga 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggggagacttataatgggcatttggttaactgtga 161
>gnl|LJGI|AV414240 homologue to UniRef100_Q38JH9 Cluster: Glycine rich protein-like;
n=1; Solanum tuberosum|Rep: Glycine rich protein-like -
Solanum tuberosum (Potato), partial (41%)
Length = 243
Score = 161 bits (81), Expect = 4e-39
Identities = 150/173 (86%)
Strand = Plus / Plus
Query: 10 ctttcccttctcaaaactgcccaagggcacccaatgttggtggagctgaaaaatggggag 69
|||||||||||||| ||||| ||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 71 ctttcccttctcaagactgctcaaggccaccctatgttggtggagctgaaaaacggggag 130
Query: 70 acttataatgggcatttggttaactgtgatacatggatgaacatccatctccgggaagtc 129
|| || || |||||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 131 acatacaacgggcatttggttaattgcgatacatggatgaacatccatcttcgagaagtc 190
Query: 130 atctgtacctctaaagaaggaactgaattttggcgtatgcctgaatgctacat 182
|| || ||| |||||| ||| | ||||||||| |||||||| ||||||||
Sbjct: 191 atttgcaccaataaagatggagatagattttggcggatgcctgagtgctacat 243