Miyakogusa Predicted Gene
- Lj5g3v1630000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1630000.1 tr|G7KSP4|G7KSP4_MEDTR E3 ubiquitin-protein
ligase BAH1 OS=Medicago truncatula GN=MTR_7g108850 PE=4
,80.77,3e-17,ZF_RING_1,Zinc finger, RING-type, conserved site; Ring
finger,Zinc finger, RING-type; ZF_RING_2,Zinc,CUFF.55653.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57876 similar to UniRef100_A7Q0B4 Cluster: Chromosome... 1925 0.0
gnl|LJGI|TC81932 similar to UniRef100_A7Q0B4 Cluster: Chromosome... 537 e-152
gnl|LJGI|TC71240 similar to UniRef100_A7Q0B4 Cluster: Chromosome... 416 e-115
gnl|LJGI|GO037162 similar to UniRef100_A7Q0B4 Cluster: Chromosom... 178 4e-44
>gnl|LJGI|TC57876 similar to UniRef100_A7Q0B4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1357
Score = 1925 bits (971), Expect = 0.0
Identities = 974/975 (99%)
Strand = Plus / Plus
Query: 1 atgaagttctgcaagacataccaggagtacatgcaagcccaggagcagaagaagcttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atgaagttctgcaagacataccaggagtacatgcaagcccaggagcagaagaagcttcct 109
Query: 61 ggggttggcttcaagaagctcaaaaagatcatgaaaaagtgtaggagagactctcaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggggttggcttcaagaagctcaaaaagatcatgaaaaagtgtaggagagactctcaatcc 169
Query: 121 cttcatgaatcacttggcatcaaatcctgccctcatcaatgcccagtgtgcgatgggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cttcatgaatcacttggcatcaaatcctgccctcatcaatgcccagtgtgcgatgggaca 229
Query: 181 tttttcccgtcccttctcaatgaaatgtcagaaatattagggtgctttaaccaccgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tttttcccgtcccttctcaatgaaatgtcagaaatattagggtgctttaaccaccgtgcc 289
Query: 241 cagaaattgctgcagctacatcttgcttctggcttcagaaagtacattctcaagttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cagaaattgctgcagctacatcttgcttctggcttcagaaagtacattctcaagttgaaa 349
Query: 301 ggaaaattcaaagggaatcatactgtccttgttcaagaaggaaaagatctagtcacatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggaaaattcaaagggaatcatactgtccttgttcaagaaggaaaagatctagtcacatat 409
Query: 361 gcactgattaatgccattgcgatacgcaaaatactgaagaaatatgataagattcattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gcactgattaatgccattgcgatacgcaaaatactgaagaaatatgataagattcattat 469
Query: 421 tccaagcaagggcaattgttcaagtcacaactccagacaatgcataaggaaattcttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tccaagcaagggcaattgttcaagtcacaactccagacaatgcataaggaaattcttcag 529
Query: 481 agtccttggctttgtgagcttatggcattacacatcaacttaagggaaactaaagtgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 agtccttggctttgtgagcttatggcattacacatcaacttaagggaaactaaagtgaag 589
Query: 541 tcaaagaaggcggcacctgcattgctcgatggatgttccctggcatttacagatggaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tcaaagaaggcggcacctgcattgctcgatggatgttccctggcatttacagatggaaaa 649
Query: 601 ccctcacttacttgtgagatctttgattccatcaaaattgatattgacctgacttgctct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ccctcacttacttgtgagatctttgattccatcaaaattgatattgacctgacttgctct 709
Query: 661 atttgtatggatacagtatttgatccagtttctctgacttgcggccacatattctgctac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atttgtatggatacagtatttgatccagtttctctgacttgcggccacatattctgctac 769
Query: 721 agttgtgcttgctcagctgcatctgtaactattgttgatggacttaaggcagcagatcca 780
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agttgcgcttgctcagctgcatctgtaactattgttgatggacttaaggcagcagatcca 829
Query: 781 aaggagaaatgtcctctatgccgagagggaggagtttatgaagatgctgttcacttagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 aaggagaaatgtcctctatgccgagagggaggagtttatgaagatgctgttcacttagaa 889
Query: 841 gaattgaatattctgttaggccgaagctgcaaggattactgggaggaaaggcttcagatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 gaattgaatattctgttaggccgaagctgcaaggattactgggaggaaaggcttcagatg 949
Query: 901 gagagggtagagagggttaagcaagcgaaggagcattgggaaatgcagtgcaggaacttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 gagagggtagagagggttaagcaagcgaaggagcattgggaaatgcagtgcaggaacttc 1009
Query: 961 atgggtgtctaagac 975
|||||||||||||||
Sbjct: 1010 atgggtgtctaagac 1024
>gnl|LJGI|TC81932 similar to UniRef100_A7Q0B4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 396
Score = 537 bits (271), Expect = e-152
Identities = 290/297 (97%)
Strand = Plus / Plus
Query: 1 atgaagttctgcaagacataccaggagtacatgcaagcccaggagcagaagaagcttcct 60
|||||||||||||| ||||||||||||||||||||| |||| ||||| || |||||||||
Sbjct: 100 atgaagttctgcaacacataccaggagtacatgcaaccccacgagcacaacaagcttcct 159
Query: 61 ggggttggcttcaagaagctcaaaaagatcatgaaaaagtgtaggagagactctcaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ggggttggcttcaagaagctcaaaaagatcatgaaaaagtgtaggagagactctcaatcc 219
Query: 121 cttcatgaatcacttggcatcaaatcctgccctcatcaatgcccagtgtgcgatgggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cttcatgaatcacttggcatcaaatcctgccctcatcaatgcccagtgtgcgatgggaca 279
Query: 181 tttttcccgtcccttctcaatgaaatgtcagaaatattagggtgctttaaccaccgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tttttcccgtcccttctcaatgaaatgtcagaaatattagggtgctttaaccaccgtgcc 339
Query: 241 cagaaattgctgcagctacatcttgcttctggcttcagaaagtacattctcaagttg 297
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 nanaaattgctgcagctacatcttgcttctggcttcagaaagtacattctcaagttg 396
>gnl|LJGI|TC71240 similar to UniRef100_A7Q0B4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 820
Score = 416 bits (210), Expect = e-115
Identities = 512/612 (83%), Gaps = 3/612 (0%)
Strand = Plus / Plus
Query: 331 gttcaagaaggaaaagatctagtcacatatgcactgattaatgccattgcgatacgcaaa 390
|||||||||||| ||||||| |||| |||||||| || ||||||||||| || || |||
Sbjct: 14 gttcaagaaggacaagatctggtcaattatgcactcatcaatgccattgcaattcgaaaa 73
Query: 391 atactgaagaaatatgataagattcattattccaagcaagggcaattgttcaagtcacaa 450
||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 74 atactcaagaaatatgataagattcattcttccaagcaagggcaattgttcaagtctcaa 133
Query: 451 ctccagacaatgcataaggaaattcttcagagtccttggctttgtgagcttatggcatta 510
|||||| ||||| |||||||||||||| || || ||||||| |||||| ||||| ||
Sbjct: 134 ttccagagcatgcacaaggaaattcttcaaagcccctggctttatgagctgatggctttc 193
Query: 511 cacatcaacttaagggaaactaaagtgaagtcaaagaaggcggcacctgcattgctcgat 570
|||||||| ||| ||||||| || ||| |||||| ||||| |||||| ||| | |||
Sbjct: 194 cacatcaatttacgggaaaccaaggtggagtcaagcaaggc---acctgctttgtttgat 250
Query: 571 ggatgttccctggcatttacagatggaaaaccctcacttacttgtgagatctttgattcc 630
|| || || |||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct: 251 caattttttctcacatttaaggatggaaaaccatcacttacttgtgagctctttgattct 310
Query: 631 atcaaaattgatattgacctgacttgctctatttgtatggatacagtatttgatccagtt 690
|||||||||||||||||| |||| || |||| || |||| ||||| ||||||||||||
Sbjct: 311 atcaaaattgatattgacttgacctgtcctatatgcttggacacagtgtttgatccagtt 370
Query: 691 tctctgacttgcggccacatattctgctacagttgtgcttgctcagctgcatctgtaact 750
|| |||||||||||||| ||||||||||| | ||||||||||| |||||||| ||| ||
Sbjct: 371 tcactgacttgcggccatatattctgctatatgtgtgcttgctcggctgcatcagtatct 430
Query: 751 attgttgatggacttaaggcagcagatccaaaggagaaatgtcctctatgccgagaggga 810
|||||||||||||||||| |||| | | | ||| ||||||||||||| ||||| |||
Sbjct: 431 attgttgatggacttaagtcagccgttactaagcagaaatgtcctctgtgccgcgagaat 490
Query: 811 ggagtttatgaagatgctgttcacttagaagaattgaatattctgttaggccgaagctgc 870
| || ||||||| |||||| ||||| |||||| | || ||||||||||||||||| ||
Sbjct: 491 gctgtctatgaaggtgctgtgcacttggaagaactaaacattctgttaggccgaagatgt 550
Query: 871 aaggattactgggaggaaaggcttcagatggagagggtagagagggttaagcaagcgaag 930
|| ||||||||| |||| |||||| |||||||||||||||||||||||| |||
Sbjct: 551 ccagaatactgggagcaaagacttcagtcagagagggtagagagggttaagcaaataaag 610
Query: 931 gagcattgggaa 942
|| |||||||||
Sbjct: 611 gaacattgggaa 622
>gnl|LJGI|GO037162 similar to UniRef100_A7Q0B4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 590
Score = 178 bits (90), Expect = 4e-44
Identities = 234/282 (82%)
Strand = Plus / Plus
Query: 146 cctgccctcatcaatgcccagtgtgcgatgggacatttttcccgtcccttctcaatgaaa 205
|||||||| |||| ||| ||||||| |||||||| || ||||| ||||||||||||||||
Sbjct: 309 cctgccctgatcactgctcagtgtgtgatgggaccttcttcccttcccttctcaatgaaa 368
Query: 206 tgtcagaaatattagggtgctttaaccaccgtgcccagaaattgctgcagctacatcttg 265
||||||| ||| | || |||| || || ||||| ||| | || ||| |||| ||||| |
Sbjct: 369 tgtcagagatagttggcagcttcaatcagcgtgcacaggagttactggagctgcatctcg 428
Query: 266 cttctggcttcagaaagtacattctcaagttgaaaggaaaattcaaagggaatcatactg 325
|||||||| ||| ||||||||| || ||| ||||| ||||| ||||||||| ||||
Sbjct: 429 cttctggcgtcaagaagtacattttctggttcaaaggcaaattacgagggaatcacactg 488
Query: 326 tccttgttcaagaaggaaaagatctagtcacatatgcactgattaatgccattgcgatac 385
|| |||||||||||| ||||||| |||| |||||||| || ||||||||||| || |
Sbjct: 489 ctctagttcaagaaggacaagatctggtcaattatgcactcatcaatgccattgcaattc 548
Query: 386 gcaaaatactgaagaaatatgataagattcattattccaagc 427
| |||||||| |||||||||||||||||||||| ||||||||
Sbjct: 549 gaaaaatactcaagaaatatgataagattcattcttccaagc 590
Score = 101 bits (51), Expect = 8e-21
Identities = 101/118 (85%), Gaps = 6/118 (5%)
Strand = Plus / Plus
Query: 1 atgaagttctgcaagacataccaggagtacatgcaagcccaggagc------agaagaag 54
|||||||||||||| | |||||||||||||||||||| |||||| | |||| |||
Sbjct: 122 atgaagttctgcaaaaaataccaggagtacatgcaaggccaggacctggagaagaaaaag 181
Query: 55 cttcctggggttggcttcaagaagctcaaaaagatcatgaaaaagtgtaggagagact 112
||||||| ||||||||||| || |||||||||||| |||||||||| ||||||||||
Sbjct: 182 cttcctgctgttggcttcaaaaacctcaaaaagatcttgaaaaagtgcaggagagact 239