Miyakogusa Predicted Gene
- Lj5g3v1627910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1627910.1 Non Chatacterized Hit- tr|I1L7V2|I1L7V2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17926
PE,77.9,0,seg,NULL; Epimerase,NAD-dependent epimerase/dehydratase; no
description,NAD(P)-binding domain; DTDP-,CUFF.55672.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57910 homologue to UniRef100_Q1M0P1 Cluster: UDP-gluc... 597 e-170
gnl|LJGI|AW720402 similar to UniRef100_A7Q0D4 Cluster: Chromosom... 323 7e-88
gnl|LJGI|BW595846 homologue to UniRef100_A9TDH4 Cluster: Predict... 165 4e-40
gnl|LJGI|TC59188 homologue to UniRef100_Q1M0P2 Cluster: UDP-gluc... 60 2e-08
>gnl|LJGI|TC57910 homologue to UniRef100_Q1M0P1 Cluster: UDP-glucuronic acid
decarboxylase 2; n=1; Populus tomentosa|Rep:
UDP-glucuronic acid decarboxylase 2 - Populus tomentosa
(Chinese white poplar), partial (71%)
Length = 1209
Score = 597 bits (301), Expect = e-170
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 229 aatgagccggtcccgatctcttacttcaaccacgagtacaagcagccggcgttccaccac 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aatgagccggtcccgatctcttacttcaaccacgagtacaagcagccggcgttccaccac 449
Query: 289 cgcatccactccgtcgggaagattccactggggatcaagcgaaaggggctccggatcgtt 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cgcatccactccgtcgggaagattccactggggatcaagcgaaaggggctccggatcgtt 509
Query: 349 gtcaccggcggagccggtttcgtcgggtcgcacctggtggatcggttgatggcgagaggc 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtcaccggcggagccggtttcgtcgggtcgcacctggtggatcggttgatggcgagaggc 569
Query: 409 gacagtgtgatcgtggttgacaatttcttcaccgggaggaaggagaacgtgatgcaccac 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gacagtgtgatcgtggttgacaatttcttcaccgggaggaaggagaacgtgatgcaccac 629
Query: 469 tttggaaaccctaggtttgaactcatccgccacgacgtcgttgagcctctcttgcttgaa 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tttggaaaccctaggtttgaactcatccgccacgacgtcgttgagcctctcttgcttgaa 689
Query: 529 g 529
|
Sbjct: 690 g 690
Score = 359 bits (181), Expect = 1e-98
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 atgggttcggaattgaattacagaaggcacgacgagacccgacccgttaacgatgcttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgggttcggaattgaattacagaaggcacgacgagacccgacccgttaacgatgcttac 221
Query: 61 tctcctaaacccgacaaaccatggctctctgtaacccgcccgattcgctacatgctccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tctcctaaacccgacaaaccatggctctctgtaacccgcccgattcgctacatgctccgc 281
Query: 121 gagcagcgactcctcttcgtcctcgccggcgtcgccatagccaccgtcttcttcaccgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gagcagcgactcctcttcgtcctcgccggcgtcgccatagccaccgtcttcttcaccgtc 341
Query: 181 g 181
|
Sbjct: 342 g 342
>gnl|LJGI|AW720402 similar to UniRef100_A7Q0D4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 588
Score = 323 bits (163), Expect = 7e-88
Identities = 165/166 (99%)
Strand = Plus / Plus
Query: 1 atgggttcggaattgaattacagaaggcacgacgagacccgacccgttaacgatgcttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgggttcggaattgaattacagaaggcacgacgagacccgacccgttaacgatgcttac 482
Query: 61 tctcctaaacccgacaaaccatggctctctgtaacccgcccgattcgctacatgctccgc 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tctnctaaacccgacaaaccatggctctctgtaacccgcccgattcgctacatgctccgc 542
Query: 121 gagcagcgactcctcttcgtcctcgccggcgtcgccatagccaccg 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gagcagcgactcctcttcgtcctcgccggcgtcgccatagccaccg 588
>gnl|LJGI|BW595846 homologue to UniRef100_A9TDH4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(25%)
Length = 482
Score = 165 bits (83), Expect = 4e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 447 gaaggagaacgtgatgcaccactttggaaaccctaggtttgaactcatccgccacgacgt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gaaggagaacgtgatgcaccactttggaaaccctaggtttgaactcatccgccacgacgt 207
Query: 507 cgttgagcctctcttgcttgaag 529
|||||||||||||||||||||||
Sbjct: 208 cgttgagcctctcttgcttgaag 230
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 atgggttcggaattgaattacagaagg 27
|||||||||||||||||||||||||||
Sbjct: 126 atgggttcggaattgaattacagaagg 152
>gnl|LJGI|TC59188 homologue to UniRef100_Q1M0P2 Cluster: UDP-glucuronic acid
decarboxylase 1; n=1; Populus tomentosa|Rep:
UDP-glucuronic acid decarboxylase 1 - Populus tomentosa
(Chinese white poplar), partial (88%)
Length = 1627
Score = 60.0 bits (30), Expect = 2e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 414 tgtgatcgtggttgacaatttcttcaccgggaggaaggagaacgtgatgcaccactttgg 473
|||||||||| |||| || |||||||||||||||||||| || || |||||| |||||
Sbjct: 460 tgtgatcgtgattgataacttcttcaccgggaggaaggataatctggtgcacctgtttgg 519
Query: 474 aaaccc 479
||||||
Sbjct: 520 aaaccc 525