Miyakogusa Predicted Gene
- Lj5g3v1602410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1602410.1 tr|I3SBE6|I3SBE6_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,99.52,0,coiled-coil,NULL;
RIBOSOMAL_L19E,Ribosomal protein L19/L19e conserved site;
Ribosomal_L19e,Ribosomal,CUFF.55714.1
(633 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62439 homologue to UniRef100_A1A4M1 Cluster: Ribosoma... 1255 0.0
gnl|LJGI|TC58322 homologue to UniRef100_A1A4M1 Cluster: Ribosoma... 525 e-148
gnl|LJGI|TC58116 homologue to UniRef100_A1A4M1 Cluster: Ribosoma... 432 e-120
gnl|LJGI|TC62088 homologue to UniRef100_A7Q0G7 Cluster: Ribosoma... 323 8e-88
gnl|LJGI|BI419356 homologue to UniRef100_A1A4M1 Cluster: Ribosom... 272 2e-72
gnl|LJGI|TC82349 similar to UniRef100_Q6RYC4 Cluster: 60S riboso... 270 1e-71
gnl|LJGI|BP057901 similar to UniRef100_Q6RYC4 Cluster: 60S ribos... 222 2e-57
gnl|LJGI|TC71003 similar to UniRef100_A7Q0G7 Cluster: Ribosomal ... 76 3e-13
>gnl|LJGI|TC62439 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (93%)
Length = 921
Score = 1255 bits (633), Expect = 0.0
Identities = 633/633 (100%)
Strand = Plus / Plus
Query: 1 atggtgtcgttgaagcttcagaagcggctctccgccagcgttctcaagtgtggtaggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atggtgtcgttgaagcttcagaagcggctctccgccagcgttctcaagtgtggtaggggc 104
Query: 61 aaggtctggcttgaccctaatgaggtcaatgaaatctccatggccaattctcgccagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aaggtctggcttgaccctaatgaggtcaatgaaatctccatggccaattctcgccagaac 164
Query: 121 attaggaagttagttaaggatggcttcattatcaggaagccaactaagattcactctcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 attaggaagttagttaaggatggcttcattatcaggaagccaactaagattcactctcgc 224
Query: 181 tctcgagctaggaggatgaaggaggctaagaggaagggacgtcactctggatacggtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tctcgagctaggaggatgaaggaggctaagaggaagggacgtcactctggatacggtaag 284
Query: 241 cgcaagggtaccagagaggcaaggcttcccaccaagatcctttggatgcggaggatgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cgcaagggtaccagagaggcaaggcttcccaccaagatcctttggatgcggaggatgcgt 344
Query: 301 gtcctcaggcgtttgcttcgcaagtacagggaggcaaagaagattgacaagcacatgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtcctcaggcgtttgcttcgcaagtacagggaggcaaagaagattgacaagcacatgtac 404
Query: 361 catgatatgtacatgaaggtgaagggtaatgtgtttaagaacaagagagtccttatggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 catgatatgtacatgaaggtgaagggtaatgtgtttaagaacaagagagtccttatggag 464
Query: 421 agtattcacaagtccaaggctgagaaggcaagagaaaagactttatctgaccagtttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agtattcacaagtccaaggctgagaaggcaagagaaaagactttatctgaccagtttgag 524
Query: 481 gctaagagagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gctaagagagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgc 584
Query: 541 cttgcccaaggtcctggagagaaggctgcaccggctgccccagctgcaacagcagcccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cttgcccaaggtcctggagagaaggctgcaccggctgccccagctgcaacagcagcccag 644
Query: 601 ccagcccaagcaactaagaaatccaagaagtaa 633
|||||||||||||||||||||||||||||||||
Sbjct: 645 ccagcccaagcaactaagaaatccaagaagtaa 677
>gnl|LJGI|TC58322 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (93%)
Length = 1251
Score = 525 bits (265), Expect = e-148
Identities = 484/557 (86%)
Strand = Plus / Plus
Query: 1 atggtgtcgttgaagcttcagaagcggctctccgccagcgttctcaagtgtggtaggggc 60
|||||||| |||| || ||||||||||| | |||||||| ||||| || || || ||
Sbjct: 39 atggtgtccctgaaactgcagaagcggcttgcagccagcgtgctcaaatgcggaagaggg 98
Query: 61 aaggtctggcttgaccctaatgaggtcaatgaaatctccatggccaattctcgccagaac 120
||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 99 aaggtttggcttgatcccaatgaatgcaatgaaatctccatggccaattctcgccagaac 158
Query: 121 attaggaagttagttaaggatggcttcattatcaggaagccaactaagattcactctcgc 180
|||||||| || ||||||||||| || |||||||||||||| || |||||||| || ||
Sbjct: 159 attaggaaattggttaaggatggatttattatcaggaagcccaccaagattcattcccgg 218
Query: 181 tctcgagctaggaggatgaaggaggctaagaggaagggacgtcactctggatacggtaag 240
|| |||||| | |||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 219 tcacgagctcgcaggatgaaggaggctaagaggaagggtcgccactctggatatggtaag 278
Query: 241 cgcaagggtaccagagaggcaaggcttcccaccaagatcctttggatgcggaggatgcgt 300
|| |||||||| ||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 279 cgtaagggtacaagagaggcaaggcttcccaccaaaatactttggatgaggaggatgcgt 338
Query: 301 gtcctcaggcgtttgcttcgcaagtacagggaggcaaagaagattgacaagcacatgtac 360
|| ||||| | ||||| || |||||||||||| | ||||| ||||||||||||||||||
Sbjct: 339 gtgctcagaagattgctccgtaagtacagggagtccaagaaaattgacaagcacatgtac 398
Query: 361 catgatatgtacatgaaggtgaagggtaatgtgtttaagaacaagagagtccttatggag 420
|||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||
Sbjct: 399 catgatatgtacatgaaggtgaagggtaatgttttcaagaacaagagagtcttaatggaa 458
Query: 421 agtattcacaagtccaaggctgagaaggcaagagaaaagactttatctgaccagtttgag 480
|| ||||||||||| |||||||||||||| ||||| |||||| | ||||| |||||||||
Sbjct: 459 agcattcacaagtcgaaggctgagaaggccagagagaagactctgtctgatcagtttgag 518
Query: 481 gctaagagagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgc 540
|| ||| | || ||||||||||| |||||||||||||| ||||||||| || ||||||
Sbjct: 519 gcgaagcgtgccaagaacaaggcaagcagggaaaggaagcttgctaggagggaggagcgc 578
Query: 541 cttgcccaaggtcctgg 557
| ||||| ||||||||
Sbjct: 579 ttggcccagggtcctgg 595
>gnl|LJGI|TC58116 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (92%)
Length = 922
Score = 432 bits (218), Expect = e-120
Identities = 532/637 (83%), Gaps = 6/637 (0%)
Strand = Plus / Plus
Query: 1 atggtgtcgttgaagcttcagaagcggctctccgccagcgttctcaagtgtggtaggggc 60
||||| ||| |||||||||||||| ||||| || |||| || |||||||| || || |||
Sbjct: 36 atggtttcgctgaagcttcagaagaggctcgcctccagtgtcctcaagtgcggaagaggc 95
Query: 61 aaggtctggcttgaccctaatgaggtcaatgaaatctccatggccaattctcgccagaac 120
|| || |||||||| || ||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 96 aaagtttggcttgatcccaatgaatgcaatgaaatctccatggctaattctcgccaaaac 155
Query: 121 attaggaagttagttaaggatggcttcattatcaggaagccaactaagattcactctcgc 180
||||||||| | || |||||||| || ||||||||||| || || |||||||| || |
Sbjct: 156 attaggaagctggtcaaggatggttttattatcaggaaacccaccaagattcattcgaga 215
Query: 181 tctcgagctaggaggatgaaggaggctaagaggaagggacgtcactctggatacggtaag 240
|| || ||| | | |||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 216 tcacgtgctcgtcgaatgaaggaagccaagaggaaaggccgacactctggatatggtaaa 275
Query: 241 cgcaagggtaccagagaggcaaggcttcccaccaagatcctttggatgcggaggatgcgt 300
|| ||||||||||| ||||| || |||||||| || |||||||||||| |||||||||||
Sbjct: 276 cgtaagggtaccagggaggcgagacttcccactaaaatcctttggatgaggaggatgcgt 335
Query: 301 gtcctcaggcgtttgcttcgcaagtacagggaggcaaagaagattgacaagcacatgtac 360
|| ||||| || |||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 336 gtgctcagacgcctgctccgcaagtacagggagtctaagaagattgacaagcacatgtac 395
Query: 361 catgatatgtacatgaaggtgaagggtaatgtgtttaagaacaagagagtccttatggag 420
||||| ||||| |||||||| ||||||||||| || |||||||||||||| | ||||||
Sbjct: 396 catgacatgtatatgaaggttaagggtaatgttttcaagaacaagagagttttgatggag 455
Query: 421 agtattcacaagtccaaggctgagaaggcaagagaaaagactttatctgaccagtttgag 480
|| ||||||||| |||| ||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 456 agcattcacaagaccaaagctgagaaggcaagagagaagacattgtctgatcagtttgag 515
Query: 481 gctaagagagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgc 540
|| || |||| ||||||||||| ||||| |||||||||||||||||||| || || ||
Sbjct: 516 gccaaacgagccaagaacaaggccagcagagaaaggaaaaatgctaggagggaggaacgt 575
Query: 541 cttgcccaaggtcctggagagaag------gctgcaccggctgccccagctgcaacagca 594
| || |||||||||||||| ||| ||||| || |||| ||| | || ||||||
Sbjct: 576 ttggctcaaggtcctggagataagccaacagctgctcccactgctccaccagctacagca 635
Query: 595 gcccagccagcccaagcaactaagaaatccaagaagt 631
| || |||||||||||| | ||||||||||||||||
Sbjct: 636 tcacaaccagcccaagcaccaaagaaatccaagaagt 672
>gnl|LJGI|TC62088 homologue to UniRef100_A7Q0G7 Cluster: Ribosomal protein L19; n=1;
Vitis vinifera|Rep: Ribosomal protein L19 - Vitis
vinifera (Grape), partial (55%)
Length = 748
Score = 323 bits (163), Expect = 8e-88
Identities = 283/323 (87%)
Strand = Plus / Plus
Query: 208 aagaggaagggacgtcactctggatacggtaagcgcaagggtaccagagaggcaaggctt 267
|||||||| || || ||||||||||| ||||| || ||||||||||| ||||| || |||
Sbjct: 5 aagaggaaaggccgacactctggatatggtaaacgtaagggtaccagggaggcgagactt 64
Query: 268 cccaccaagatcctttggatgcggaggatgcgtgtcctcaggcgtttgcttcgcaagtac 327
||||| || |||||||||||| ||||||||||||| ||||| || |||| |||||||||
Sbjct: 65 cccactaaaatcctttggatgaggaggatgcgtgtgctcagacgcctgctccgcaagtac 124
Query: 328 agggaggcaaagaagattgacaagcacatgtaccatgatatgtacatgaaggtgaagggt 387
|||||| | ||||||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 125 agggagtctaagaagattgacaagcacatgtaccatgacatgtatatgaaggttaagggt 184
Query: 388 aatgtgtttaagaacaagagagtccttatggagagtattcacaagtccaaggctgagaag 447
||||| || |||||||||||||| | |||||||| ||||||||| |||| |||||||||
Sbjct: 185 aatgttttcaagaacaagagagttttgatggagagcattcacaagaccaaagctgagaag 244
Query: 448 gcaagagaaaagactttatctgaccagtttgaggctaagagagcaaagaacaaggctagc 507
|||||||| ||||| || ||||| ||||||||||| || |||| ||||||||||| |||
Sbjct: 245 gcaagagagaagacattgtctgatcagtttgaggccaaacgagccaagaacaaggccagc 304
Query: 508 agggaaaggaaaaatgctaggag 530
|| ||||||||||||||||||||
Sbjct: 305 agagaaaggaaaaatgctaggag 327
>gnl|LJGI|BI419356 homologue to UniRef100_A1A4M1 Cluster: Ribosomal protein L19; n=1;
Bos taurus|Rep: Ribosomal protein L19 - Bos taurus
(Bovine), partial (74%)
Length = 467
Score = 272 bits (137), Expect = 2e-72
Identities = 227/257 (88%)
Strand = Plus / Plus
Query: 262 aggcttcccaccaagatcctttggatgcggaggatgcgtgtcctcaggcgtttgcttcgc 321
|||||||||||||| || ||||||||| ||||||||||||| |||| | ||||| ||
Sbjct: 205 aggcttcccaccaaaatactttggatgaggaggatgcgtgtgctcacaagattgctccgt 264
Query: 322 aagtacagggaggcaaagaagattgacaagcacatgtaccatgatatgtacatgaaggtg 381
|||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagtacagggagtccaagaaaattgacaagcacatgtaccatgatatgtacatgaaggtg 324
Query: 382 aagggtaatgtgtttaagaacaagagagtccttatggagagtattcacaagtccaaggct 441
||||||||||| || ||||||||||||||| | ||||| || ||||||||||| ||||||
Sbjct: 325 aagggtaatgttttcaagaacaagagagtcttaatggaaagcattcacaagtcgaaggct 384
Query: 442 gagaaggcaagagaaaagactttatctgaccagtttgaggctaagagagcaaagaacaag 501
|||||||| ||||| |||||| | ||||| ||||||||||| ||| | || |||||||||
Sbjct: 385 gagaaggccagagagaagactctgtctgatcagtttgaggcgaagcgtgccaagaacaag 444
Query: 502 gctagcagggaaaggaa 518
|| ||||||||||||||
Sbjct: 445 gcaagcagggaaaggaa 461
Score = 165 bits (83), Expect = 4e-40
Identities = 176/207 (85%)
Strand = Plus / Plus
Query: 1 atggtgtcgttgaagcttcagaagcggctctccgccagcgttctcaagtgtggtaggggc 60
|||||||| |||| || ||||||||||| | |||||||| ||||| || || || ||
Sbjct: 3 atggtgtccctgaaactgcagaagcggcttgcagccagcgtgctcaaatgcggaagaggg 62
Query: 61 aaggtctggcttgaccctaatgaggtcaatgaaatctccatggccaattctcgccagaac 120
||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 63 aaggtttggcttgatcccaatgaatgcaatgaaatctccatggccaattctcgccagaac 122
Query: 121 attaggaagttagttaaggatggcttcattatcaggaagccaactaagattcactctcgc 180
|||||||| || ||||||||||| || |||||||||||||| || |||||||| || ||
Sbjct: 123 attaggaaattggttaaggatggatttattatcaggaagcccaccaagattcattcccgg 182
Query: 181 tctcgagctaggaggatgaaggaggct 207
|| |||||| | |||||||||||||||
Sbjct: 183 tcacgagctcgcaggatgaaggaggct 209
>gnl|LJGI|TC82349 similar to UniRef100_Q6RYC4 Cluster: 60S ribosomal protein L19;
n=1; Capsicum annuum|Rep: 60S ribosomal protein L19 -
Capsicum annuum (Bell pepper), partial (15%)
Length = 504
Score = 270 bits (136), Expect = 1e-71
Identities = 144/147 (97%)
Strand = Plus / Plus
Query: 487 agagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgccttgcc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 agagcaaagaacaaggctagcagggaaaggaaaaatgctaggagagaagagcgccttgcc 133
Query: 547 caaggtcctggagagaaggctgcaccggctgccccagctgcaacagcagcccagccagcc 606
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 caaggtcctggaaagaaggatgcaccggctgccccagctgcaacagcagcccagccagcc 193
Query: 607 caagcaactaagaaatccaagaagtaa 633
||||||| |||||||||||||||||||
Sbjct: 194 caagcaantaagaaatccaagaagtaa 220
>gnl|LJGI|BP057901 similar to UniRef100_Q6RYC4 Cluster: 60S ribosomal protein L19;
n=1; Capsicum annuum|Rep: 60S ribosomal protein L19 -
Capsicum annuum (Bell pepper), partial (23%)
Length = 398
Score = 222 bits (112), Expect = 2e-57
Identities = 176/196 (89%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 439 gctgagaaggcaagagaaaagactttatctgaccagtttgaggctaagagagcaaagaac 498
||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 398 gctgagaaggccagagaaaagactttatctgacccgtttgaggctaagagagccaagaac 339
Query: 499 aaggctagcagggaaaggaaaaatgctaggagagaagagcgccttgcccaaggtcctgga 558
|||||||| ||| |||| ||||||||||||||||||||| |||||||| |||| |||||
Sbjct: 338 caggctagccggggaagggaaaatgctaggagagaagagccccttgccccaggttctgga 279
Query: 559 gagaaggctgcaccggctgccccagctgcaacag-cagcccagccagcccaagcaactaa 617
||||||||||||||||||||||| ||||| |||| |||||| ||| |||| ||| ||| |
Sbjct: 278 gagaaggctgcaccggctgcccccgctgccacagccagccccgcccgccccagccactta 219
Query: 618 gaaatccaagaagtaa 633
| ||||| ||||||||
Sbjct: 218 ggaatcccagaagtaa 203
>gnl|LJGI|TC71003 similar to UniRef100_A7Q0G7 Cluster: Ribosomal protein L19; n=1;
Vitis vinifera|Rep: Ribosomal protein L19 - Vitis
vinifera (Grape), partial (38%)
Length = 939
Score = 75.8 bits (38), Expect = 3e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 43 ctcaagtgtggtaggggcaaggtctggcttgaccctaatgaggtcaatgaaatctccatg 102
|||||||| || || ||||| || |||||||| || ||||| ||||||||||||||||||
Sbjct: 353 ctcaagtgcggaagaggcaaagtttggcttgatcccaatgaagtcaatgaaatctccatg 412
Query: 103 gccaattctc 112
||||||||||
Sbjct: 413 gccaattctc 422
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 118 aacattaggaagttagttaaggatggcttcattatcaggaagccaactaagattca 173
||||| |||||||| || |||||||| |||||||||||||| || ||| |||||||
Sbjct: 698 aacataaggaagttggtcaaggatgggttcattatcaggaaacctactgagattca 753