Miyakogusa Predicted Gene
- Lj5g3v1602360.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1602360.3 Non Chatacterized Hit- tr|I1JQP3|I1JQP3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43313 PE,76.69,0,Kinesin
motor, catalytic domain. ATPase.,Kinesin, motor domain;
Kinesin,Kinesin, motor domain; KINES,CUFF.55607.3
(2643 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68916 weakly similar to UniRef100_A4GU96 Cluster: Kin... 801 0.0
gnl|LJGI|BP052889 weakly similar to UniRef100_A4GU96 Cluster: Ki... 129 1e-28
gnl|LJGI|TC79369 similar to UniRef100_A4GU96 Cluster: Kinesin-re... 84 5e-15
gnl|LJGI|BP042724 similar to UniRef100_Q9PJH6 Cluster: Type III ... 72 2e-11
gnl|LJGI|TC76135 weakly similar to UniRef100_A4GU96 Cluster: Kin... 62 2e-08
gnl|LJGI|BP040614 similar to UniRef100_A7Q9E6 Cluster: Chromosom... 54 5e-06
>gnl|LJGI|TC68916 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (9%)
Length = 592
Score = 801 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Plus
Query: 2228 aagaagataatgagcaaatgtccgaggtcttttatcagaaatatctccaagattcttcca 2287
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aagaagataatgagcaaatgtccgaggtcttttatcaaaaatatctccaagattcttcca 60
Query: 2288 aaacttactcggaacgaccatacaacacgttcatgggtggcaacaagttcaacattgcgg 2347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacttactcggaacgaccatacaacacgttcatgggtggcaacaagttcaacattgcgg 120
Query: 2348 gttcagatgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttac 2407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcagatgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttac 180
Query: 2408 tttggcaatttaatcattccaaacttaccagcatagccaatggcaatggatcaaaggcta 2467
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttggcaatttaatcattcccaacttaccagcatagccaatggcaatggatcaaaggcta 240
Query: 2468 ggaaacctatctcaaagtcagcaaaaagcccagaattgagcaagaacagtattcattctt 2527
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaacctatctcaaagtcagccaaaagcccagaattgagcaagaacagtattcattctt 300
Query: 2528 cttctcttggtccttcaccttcacgcaaacaaacaaatggtggtgtctcacatcgaacag 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttctcttggtccttcaccttcacgcaaacaaacaaatggtggtgtctcacatcgaacag 360
Query: 2588 gaaggcatccagctccaattgacatgaaacgtaagactggaagtagaaagtaaaaa 2643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaggcatccagctccaattgacatgaaacgtaagactggaagtagaaagtaaaaa 416
>gnl|LJGI|BP052889 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (10%)
Length = 511
Score = 129 bits (65), Expect = 1e-28
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 2354 atgacatggatgatcttgatgctgcaaccagtgattcctcagaacctgacttactttggc 2413
||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 191 atgacatggatgaacttgatgctgcaaccagtgattcctcggaacctgacttgctttggc 132
Query: 2414 aatttaatcattccaaactta 2434
|||||||||| ||||||||||
Sbjct: 131 aatttaatcactccaaactta 111
Score = 99.6 bits (50), Expect = 9e-20
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Minus
Query: 2051 ctcagagctttgattttgatgagatatcaacgaattcaccaccctggcccccagtgaaaa 2110
||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||
Sbjct: 422 ctcagggctttgattttgatgagatatcagcaaattcaccgccctggcccccagtg-aat 364
Query: 2111 gtccaggacaaaactctggggaagatgataaagaaactggttctggagactgggttgata 2170
|| ||| | || |||||| ||||| | |||||| |||| |||||| ||||| ||||
Sbjct: 363 gttcag-----agctatggggaggatgacagagaaacaggttatggagattgggtggata 309
Query: 2171 aagtcatggtaaacaagcaaga 2192
| ||||||||||||||||||||
Sbjct: 308 aggtcatggtaaacaagcaaga 287
>gnl|LJGI|TC79369 similar to UniRef100_A4GU96 Cluster: Kinesin-related protein; n=1;
Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (3%)
Length = 584
Score = 83.8 bits (42), Expect = 5e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 2382 cagtgattcctcagaacctgacttactttggcaatttaatcattccaaactta 2434
|||||||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1 cagtgattcctcggaacctgacttgctttgncaatttaatcattccaaactta 53
>gnl|LJGI|BP042724 similar to UniRef100_Q9PJH6 Cluster: Type III secretion inner
membrane protein SctT; n=1; Chlamydia muridarum|Rep: Type
III secretion inner membrane protein SctT - Chlamydia
muridarum, partial (6%)
Length = 426
Score = 71.9 bits (36), Expect = 2e-11
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 2574 ctcacatcgaacaggaaggcatccagctccaattgacatgaaacgtaagactggaagtag 2633
|||||||||||||||||||||||||||| || ||||| |||||| || ||||| ||| |
Sbjct: 324 ctcacatcgaacaggaaggcatccagcttcagttgacgcgaaacggaaaactgggagtcg 265
Query: 2634 aaagtaaa 2641
||||||||
Sbjct: 264 aaagtaaa 257
>gnl|LJGI|TC76135 weakly similar to UniRef100_A4GU96 Cluster: Kinesin-related protein;
n=1; Gossypium hirsutum|Rep: Kinesin-related protein -
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum),
partial (3%)
Length = 512
Score = 61.9 bits (31), Expect = 2e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 2384 gtgattcctcagaacctgacttactttggcaatttaatcattccaaactta 2434
|||||||||| ||||||||||| ||||||| ||||||||| ||| ||||||
Sbjct: 1 gtgattcctcggaacctgacttgctttggctatttaatcactccgaactta 51
>gnl|LJGI|BP040614 similar to UniRef100_A7Q9E6 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 504
Score = 54.0 bits (27), Expect = 5e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1429 ttggcgggaagtgagagggttgataaatctgaggc 1463
||||| ||||||||||||||||| |||||||||||
Sbjct: 391 ttggctggaagtgagagggttgaaaaatctgaggc 425